Protein

View in Explore
Genbank accession
WYV99535.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MARKKKVVKPETKIVKGYSNAVALPDGKISCTIEHAEYGPLPFTYCPNDKEQTSIELGLLLEADGVVHSKLDECPSVKMWEARGARTWRNTELLRADVIINKIEDFEIEGDSKPWRQYRATLRNWPDTPEFPNTKPTAPDA
Physico‐chemical
properties
protein length:141 AA
molecular weight: 15984,02250 Da
isoelectric point:6,15193
aromaticity:0,07801
hydropathy:-0,66383

Domains

Domains [InterPro]
DC_1493
STR
1–85
DC_1493 IPR031893
WYV99535.1
1 141
Architecture
STR
ENZ
STR 1-85 | ENZ 86-139 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuM-Kassivere
[NCBI] 		3132620 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYV99535.1 [NCBI]
Genbank nucleotide accession
PP496416.1 [NCBI]
CDS location
range 21845 -> 22270
strand +
CDS
ATGGCTAGAAAGAAAAAGGTTGTAAAACCAGAAACTAAAATTGTGAAAGGCTACAGCAACGCTGTAGCCCTTCCTGATGGGAAGATTAGCTGCACAATCGAGCACGCAGAGTATGGTCCACTGCCGTTCACATACTGCCCAAACGACAAAGAGCAAACATCGATTGAACTCGGGCTTCTGCTTGAAGCTGATGGCGTTGTCCACAGTAAACTGGATGAATGTCCGAGTGTTAAGATGTGGGAGGCTAGGGGTGCCCGAACATGGCGTAATACAGAGCTTCTCCGTGCAGACGTAATCATCAATAAGATCGAAGACTTCGAGATTGAGGGTGATAGCAAACCTTGGCGTCAGTATCGTGCGACACTTCGTAATTGGCCTGACACGCCAGAATTCCCAAATACTAAACCAACAGCACCGGACGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ecb5104a0461a2773ce7b23d519b532c9fe63424307aeb1bba964dd353438986
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7871
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank