Protein

Genbank accession
QCG76049.1 [GenBank]
Protein name
YomR-like protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGYELRLSNNYYQNRELTSFPSYQEVVSDWSKATSVNLYDAWEGKAIGGVTAGWSATSILSYTRTPDPISTNAASLYSYALYMDQVSDFNITIKISSSSIRNNRLGLCVAGQKGKYISAVRSLGNTSSSGSGRNWELILDNNKTRTILSSKTIGINSPAGATSTSSTGYLGWSNRYTIINVIRENNKITAKCSDWNSNVILDNSVFTIDLNDDTLTDFKTSALFGFVSGNQDLCTFEVLSFSAKCYNKIPGLNVPDNYISSNLLSISMPGYNSAGYEKAFSESMIWMVENFASSSPPQNAIKGQLWYKTEGPGTQGSFYVYVGEPGEFTNLAKWHPLTQGTLDLLSAHINDKNDPHQVTKEQIGLGLVDNVNTFDKTLNLADVLNKAAARNNLSIYGKNETYNSQEYNNLFVDKSNSSSPDSELLGGLDSTAYVKKQTPFVTSSITSSVTSGDVIVMNDNSFRLAYKPNYGTSLILGGTVTDIHSQNNTTAVSMNMVTNNTLDNGIQFVFYDAGAINTPLVANSIISFKADNLYIGSGNLAFHDRRPPTAAEVGALAWNGTAVDSYLLNGKINSTSPGANTIAVRYTPSNLPDANGGYLSASSFSMTYTNADPMSVNAQVTFRNNNTNDNYVRFASRDQLVTYLGYDWKVEIDMPKGLASFSDTNLTGGSFFVINTLNLSITKLGTGLYRFYFTTLRPTNTNYAVMTQCMSEGHVGAIEGDVVNYSKAFRAVSIYCYNKTLSYFDVASTLNSNFNNNDGTGYQDYSREYDDPGLASLQVYFSSWVNL
Physico‐chemical
properties
protein length:787 AA
molecular weight: 86081,40350 Da
isoelectric point:5,15856
aromaticity:0,11309
hydropathy:-0,28704

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_PA5oct
[NCBI] 		2163605 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCG76049.1 [NCBI]
Genbank nucleotide accession
MK797984 [NCBI]
CDS location
range 100559 -> 102922
strand -
CDS
ATGGGTTACGAATTACGTTTATCAAATAATTATTACCAAAATAGAGAACTAACTTCTTTTCCTAGTTACCAAGAAGTTGTTTCCGATTGGTCAAAAGCTACATCAGTTAACTTGTATGATGCATGGGAAGGAAAAGCAATAGGCGGCGTCACTGCAGGATGGTCAGCTACTTCTATTCTTTCTTACACAAGAACTCCTGATCCTATATCAACTAATGCAGCATCGTTATATAGCTATGCGTTATACATGGATCAAGTTAGTGATTTTAATATTACAATAAAAATATCTAGCAGTTCTATAAGAAATAACAGGTTAGGTTTGTGTGTTGCTGGACAAAAAGGAAAATATATATCTGCTGTCCGGTCATTAGGTAATACATCCAGCAGTGGATCTGGAAGGAATTGGGAACTAATTTTAGATAACAATAAAACCAGAACGATTCTTTCTAGTAAAACAATAGGAATTAATAGTCCTGCTGGGGCTACTTCTACATCATCTACAGGATATCTCGGTTGGTCAAATAGATATACAATTATTAATGTAATTAGAGAAAATAATAAAATAACAGCTAAGTGTTCCGACTGGAATTCTAACGTAATATTAGATAACTCAGTGTTTACTATAGATCTAAACGATGATACACTAACTGATTTTAAAACATCTGCATTATTTGGATTTGTATCAGGTAATCAGGATTTATGTACTTTCGAAGTATTATCTTTTTCTGCAAAGTGCTATAACAAGATTCCAGGATTAAATGTACCCGATAACTATATTTCTTCTAACTTACTTTCTATATCTATGCCAGGATATAATTCGGCAGGTTACGAAAAAGCATTTAGTGAATCCATGATATGGATGGTAGAAAACTTTGCTAGTTCTTCTCCTCCCCAAAATGCTATAAAAGGACAACTATGGTATAAAACAGAAGGACCCGGTACACAAGGATCATTTTATGTATATGTAGGAGAACCTGGCGAATTTACAAATCTAGCAAAATGGCATCCATTAACTCAGGGCACATTAGATTTACTTAGTGCTCACATTAATGATAAAAACGACCCTCATCAAGTTACAAAAGAACAGATAGGGCTAGGGTTAGTAGATAACGTAAATACATTCGATAAAACACTGAACCTAGCAGATGTTTTAAATAAGGCAGCCGCTAGAAATAATTTATCTATATATGGTAAAAACGAAACATACAATTCCCAAGAATATAATAATCTATTCGTAGATAAATCAAATAGTTCTTCTCCAGATTCAGAATTACTAGGCGGGTTAGATAGCACAGCTTACGTTAAAAAACAAACACCGTTTGTTACTTCGTCTATAACTTCATCTGTTACATCAGGAGATGTAATAGTAATGAATGATAATAGTTTCAGATTAGCATATAAACCTAATTATGGAACTAGTCTAATACTAGGCGGTACTGTTACAGATATTCATTCTCAAAATAATACTACTGCTGTTAGTATGAATATGGTTACTAACAATACATTAGATAACGGAATACAGTTTGTCTTCTATGATGCTGGTGCAATAAATACCCCATTAGTAGCAAATAGTATCATATCATTTAAAGCAGACAATCTATATATAGGTTCTGGTAATTTAGCATTCCACGACAGACGGCCGCCGACTGCTGCCGAAGTAGGAGCGTTGGCGTGGAACGGTACTGCCGTAGATTCATATTTACTTAACGGTAAAATAAATTCAACTAGTCCGGGTGCCAACACAATAGCAGTAAGATATACGCCTTCTAATCTTCCTGATGCAAACGGCGGGTATCTATCTGCATCTTCATTTAGTATGACATACACTAATGCAGACCCTATGTCAGTAAATGCCCAAGTAACATTTAGAAACAATAATACTAATGACAATTATGTTCGTTTTGCTAGCAGGGACCAATTAGTAACTTATTTAGGATATGACTGGAAAGTAGAAATAGATATGCCAAAAGGTCTAGCATCATTCTCAGACACAAATCTTACGGGCGGCTCCTTCTTTGTAATAAACACTTTAAACTTATCTATAACAAAATTAGGAACAGGATTATATAGATTCTATTTTACTACTTTGCGTCCAACAAATACAAATTATGCTGTTATGACACAATGTATGTCAGAGGGGCATGTAGGTGCCATAGAGGGAGATGTTGTTAACTATTCTAAAGCATTTAGAGCAGTGTCTATATATTGCTATAACAAAACATTATCATACTTTGACGTTGCTAGTACATTAAACAGTAACTTTAATAACAACGACGGAACCGGTTATCAAGATTATTCGAGGGAATATGACGATCCGGGATTAGCATCATTACAAGTATATTTTTCATCCTGGGTAAATCTATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
c77d60d84b0e1259e421cf26ca8790434412bed5633d8f11ac7d8b8ef024860b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2381
Evidence 0,2381
Download PDB

Literature

Title Authors Date PMID Source
Integrative omics analysis of Pseudomonas aeruginosa virus PA5oct highlights the molecular complexity of jumbo phages Lood,C., Danis-Wlodarczyk,K., Blasdel,B.G., Jang,H.B., Vandenheuvel,D., Briers,Y., Noben,J.-P., van Noort,V., Drulis-Kawa,Z. and Lavigne,R. 2019 — GenBank
Genomics, Transcriptomics, and structural analysis of Pseudomonas virus PA5oct highlights the molecular complexity among Jumbo phages Lood,C., Danis-Wlodarczyk,K., Blasdel,B., Jang,H.B., Vandenheuvel,D., Briers,Y., Noben,J.-P., Kawa,Z. and Lavigne,R. 2019-06-22 — GenBank