Protein

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Genbank accession
QVV96883.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,69
Protein sequence
MPLYSQSIKNLKGGMSQQPDILRFQDQGANQVNSWSSESEGLQKRPPTVWKRRVSSSEDIQDNSKFHLINRDEFEQYYVVFTGKGLRVFDLDGKEYTVKGGTDAYLKSATPQVSFRVITVADYTFIVNRGTTIEIDDSKLSHPGYDMQHRALINLRGGQYGRKLTVSINGGPKVEHQLPNGSSATDDPPKVDAQYIGEQLRTLLVAAYPTYTFNLGSGYIEIIAPAGGKITTVDTSDGYANQLINAILDTVQSVSKLPLAAPNGYIIRIQGETNSSSDEYFVRYDSSKKTWRETVEPGVTTTFKAETMPHSLVRQADGSFEFKTLEWGERGAGNDDTNPMPSFTDSTINDVFFYRNRLGFLSGENVILSRPAGYFSFFPKSVATLSDDDPIDVAVSHPRISVLKYAVPFAEQLLLWSDEVQFVMTSSGVLTAKSIQLDVGSEFAVSDEARPYSVGRSVFFAAPRGTFTSINRYFAVADVSDVKDADDVTGHVLSLIPNGVFDIQGSSTENFLSVTSSGAQNLMFIYKFLFKDGQQLQASWGIWDMGSDCKVLASACIGSTIHIVRKSVSGVDFEALTFLKDSTDMQDEPYRIYMDAKVEYAVPTDAYDIQTNTTTIDLMLAYGYRPAPGSYQVVDSKGRYVKFPSQNFGSSTFLTLPGNWQGLKVFIGRAYMMTYEFSKFLIKKEDQAGTQTVDAGRLQLRRAWVNYQDTGALRLRVLTPGREFLNTLNGYKLGKQDIGSVSIGSGQLRFPMNGDANHTTLILESDYPTPVSIIGCGWEASYARKTRPI
Physico‐chemical
properties
protein length:789 AA
molecular weight: 87422,13400 Da
isoelectric point:5,52023
aromaticity:0,11027
hydropathy:-0,30215

Domains

Domains [InterPro]
IPR058003
TTP
1–787
IPR058003
QVV96883.1
1 789
Architecture
TTP
TTP 1-787 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVV96883.1
1 789
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9922
Central domain 146 347 203 0,0773
C-terminal 348 789 441 0,1815
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-347
C-terminal
348-789

Taxonomy

  Name Taxonomy ID Lineage
Phage Kosakonia phage Kc166A
[NCBI] 		2801381 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Kayfunavirus
Host Kosakonia cowanii
[NCBI] 		208223 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVV96883.1 [NCBI]
Genbank nucleotide accession
MW258709 [NCBI]
CDS location
range 24947 -> 27316
strand +
CDS
ATGCCACTATATTCACAATCAATCAAGAACCTTAAGGGTGGCATGAGTCAGCAACCCGACATCCTGAGGTTTCAGGACCAAGGGGCTAATCAGGTGAACTCCTGGTCCTCCGAGAGCGAGGGACTCCAGAAGCGCCCACCTACAGTCTGGAAGCGCAGAGTCTCTTCGTCTGAGGACATCCAGGATAACTCCAAGTTCCACCTGATTAACCGCGATGAGTTCGAGCAGTATTATGTCGTGTTCACCGGGAAGGGACTCAGGGTCTTTGACCTTGATGGTAAGGAGTACACCGTCAAGGGTGGAACTGACGCCTACCTGAAGTCTGCCACACCGCAGGTCTCCTTCCGGGTCATTACAGTTGCTGACTACACGTTCATCGTAAACCGGGGGACAACCATCGAGATTGATGACTCCAAGCTGAGCCACCCTGGGTACGACATGCAGCACCGGGCGCTGATTAACCTCCGTGGTGGTCAGTATGGTCGTAAGCTTACGGTCTCCATCAACGGTGGACCTAAGGTTGAGCACCAGCTGCCGAACGGCTCCAGTGCGACTGATGACCCGCCTAAGGTCGACGCTCAGTACATTGGGGAACAGCTGCGAACACTTCTGGTAGCGGCCTATCCGACCTATACGTTTAACCTTGGGTCGGGGTACATCGAGATTATCGCTCCAGCAGGCGGTAAGATTACCACGGTTGATACCTCTGACGGCTACGCCAACCAGCTTATTAATGCCATCCTGGACACAGTACAGAGTGTGAGTAAGCTCCCGCTGGCGGCACCTAACGGTTACATCATCCGAATCCAGGGTGAGACCAACAGTTCCTCAGATGAGTACTTCGTCCGGTATGACTCCAGCAAGAAGACCTGGCGTGAGACCGTGGAGCCGGGAGTCACTACGACCTTCAAGGCTGAGACAATGCCTCATAGTCTGGTACGTCAGGCTGATGGAAGCTTTGAGTTCAAGACCCTTGAGTGGGGTGAGCGTGGCGCTGGCAATGACGATACTAACCCTATGCCCAGCTTTACGGACTCCACGATTAACGATGTGTTCTTCTATCGTAACCGACTCGGTTTCCTGTCTGGTGAGAACGTCATCCTGTCCAGACCTGCGGGATACTTCTCGTTCTTCCCGAAGAGTGTAGCGACCCTGAGCGATGATGACCCGATTGACGTAGCTGTGAGTCACCCTCGAATCTCGGTCCTGAAGTACGCTGTACCGTTCGCTGAACAGCTCCTCTTGTGGTCTGATGAGGTTCAATTCGTGATGACCAGCTCCGGGGTGCTGACCGCCAAGTCCATCCAACTTGATGTCGGCTCAGAGTTTGCTGTAAGCGACGAGGCGCGCCCTTACTCAGTGGGACGCTCGGTCTTCTTTGCTGCCCCTCGTGGGACCTTCACCAGCATTAACCGCTACTTTGCGGTGGCTGACGTCTCAGACGTTAAGGATGCCGATGATGTGACCGGGCATGTTCTCTCATTGATTCCTAACGGAGTGTTCGACATCCAGGGGTCATCCACTGAGAACTTCCTGTCCGTGACTTCCAGTGGCGCACAGAACCTGATGTTCATCTACAAGTTCCTGTTTAAAGATGGACAGCAGCTCCAGGCTTCCTGGGGTATCTGGGACATGGGGTCGGACTGCAAGGTGCTGGCCTCTGCCTGTATTGGGTCAACTATCCATATCGTGCGTAAGTCTGTCTCCGGTGTGGACTTCGAGGCTTTGACCTTCCTGAAGGACTCCACGGACATGCAGGATGAGCCTTATCGCATCTACATGGATGCCAAGGTTGAGTATGCGGTCCCGACTGACGCCTACGACATTCAGACCAACACGACGACGATTGACCTGATGCTGGCTTATGGGTATCGTCCTGCCCCAGGCTCTTACCAGGTGGTAGACTCTAAAGGTCGTTACGTCAAGTTCCCTTCTCAGAACTTCGGGTCCTCTACCTTCCTGACTCTACCAGGCAACTGGCAAGGGCTGAAGGTATTCATTGGCCGTGCCTACATGATGACCTATGAGTTTTCCAAGTTCCTCATCAAGAAGGAGGACCAGGCGGGGACACAGACAGTCGATGCTGGCAGGTTGCAGCTGCGGCGCGCATGGGTTAACTATCAGGACACTGGCGCTCTGAGACTTCGGGTCCTGACCCCAGGTCGTGAGTTCCTCAACACGCTCAATGGCTACAAGCTCGGTAAGCAGGACATTGGGTCCGTGAGCATTGGGTCAGGGCAGCTGAGGTTTCCGATGAACGGGGATGCTAATCACACCACGTTGATTCTGGAGTCAGACTATCCGACCCCGGTGTCAATCATTGGGTGCGGCTGGGAGGCATCTTACGCTCGCAAGACGCGACCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c02860558c5692e05c774883beb1a70bceff2a27fa3f0b058c6eba78cf888ed8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3116
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Viruses That Lyse Plant and Human Strains of Kosakonia cowanii Petrzik,K., Brazdova,S. and Krawczyk,K. 2021 — GenBank