Protein

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Genbank accession
AMD42759.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,74
Protein sequence
MIIQYNYNPDGSIASTVLLNATTGTPYGAPVGEITVCPTDIGQPDRDMQVLCDVQANGTQVPIVRDYVRDPNGIIISFNDYTVNGVSYTATGTVGSCIPRDVETVILCDSAATPNRFLRTYTYGSTGAISGFTDTTLAGAPFTPTGAVNNCVVTTATDQDFLEEVLCDGNGTPFIRRFTFNSQTGAVISTTNLTLAGTAFTPVGTVGTCTGCCPVVMGEGCTNTGSGRYTALRLANGTISLIDSVTGTAVTQAQIIACAGDGGTSGVTLTAEARTVTNGTPWTPGADVTGTLTSVTVTGTVGLWDMVDANGTALTGLPPGLTLTWSALDGNTLTGPQSITPQTGSTVVVNWTRK
Physico‐chemical
properties
protein length:354 AA
molecular weight: 36335,21080 Da
isoelectric point:4,15336
aromaticity:0,06215
hydropathy:0,12006

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AMD42759.1
1 354
Domain Start End Length (AA) Confidence
N-terminal 1 289 289 0,9007
Central domain 290 343 55 0,1167
C-terminal 344 354 10 0,9819
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-289
Central
290-343
C-terminal
344-354

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Xkcd426
[NCBI] 		1784947 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMD42759.1 [NCBI]
Genbank nucleotide accession
KU530220 [NCBI]
CDS location
range 19824 -> 20888
strand +
CDS
GTGATCATCCAGTACAACTACAACCCTGATGGGTCGATCGCGTCCACGGTCCTGCTGAACGCCACCACGGGCACCCCGTACGGCGCGCCGGTCGGCGAGATCACCGTCTGTCCGACGGACATCGGTCAGCCGGACCGGGACATGCAGGTTCTGTGCGACGTCCAGGCCAACGGGACTCAGGTCCCCATCGTCCGGGACTACGTCCGGGACCCGAACGGGATCATCATCAGCTTCAACGACTACACGGTGAACGGTGTCTCGTACACCGCGACCGGTACGGTCGGAAGCTGCATCCCGAGGGATGTCGAAACGGTCATCCTGTGTGACTCGGCGGCCACCCCGAACCGCTTCCTGCGGACGTACACGTACGGTTCGACTGGTGCTATCAGCGGCTTCACGGACACCACGCTGGCTGGCGCGCCGTTCACGCCGACCGGGGCTGTGAACAACTGCGTGGTGACCACCGCGACGGACCAGGACTTCCTGGAAGAAGTTCTGTGCGATGGGAACGGTACCCCGTTCATTCGGCGGTTCACCTTCAACAGCCAGACGGGCGCGGTCATCTCGACCACGAACCTGACACTGGCTGGCACTGCGTTCACGCCGGTCGGTACGGTCGGCACCTGCACCGGCTGTTGTCCGGTCGTCATGGGCGAAGGCTGCACCAACACGGGGTCCGGCCGGTACACCGCGCTGCGGCTGGCCAATGGCACCATCAGCCTGATCGACTCGGTTACTGGCACGGCCGTCACACAGGCGCAGATCATCGCCTGTGCGGGTGACGGCGGGACGTCCGGGGTCACCCTGACGGCCGAGGCCCGTACGGTCACCAACGGCACCCCGTGGACGCCGGGGGCGGACGTGACGGGGACGCTGACGTCGGTCACCGTGACCGGCACGGTCGGTCTGTGGGACATGGTCGACGCCAACGGCACCGCCCTGACGGGACTTCCGCCGGGGCTGACACTGACGTGGTCGGCGCTGGATGGGAACACCCTGACCGGCCCGCAGTCGATCACGCCGCAGACGGGGTCGACTGTCGTGGTGAACTGGACCCGGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
242f901bf6a34d4832b922a05437e6a48ae493d99e47e577f083ff2a92d26789
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7097
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50