Protein

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Genbank accession
QIG65085.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,88
Protein sequence
MIKKYELVDESGRKRLRALRSFSVQGREVNVHDLGGYVYDDKTLSQDGNCWIFSGSLEYPGVRVMDEAIVDMGTNLASPVTARMKSVVISGNSRIMGPIQFTGAETTSQAGIVWEQGGYTATVGMIPVKASDGSRIRIPASVFGGSVGAVSITSAAHEARIISLDSDGLVTDGGTWTAGGPAVTLTTTSPNFLVEVRKTPSGAITPADVATAGVTVTTALETSLEVTNSSIITLYDGAIASSANALAFRVFDGKSTIRNSSIRIEAFATASNALNFLADFDKVNAIFTPTKGSGAIINGIYIRSNVTAPGSMVSTGFTKSRQFVVKDCPEFTWSATVFPAIADFRSSGKVFTFNRCNMPAGSAIHYYDPKVNVWDNIDFTKAMADLGKEAFVGTTIISSNVQGMYRAKGNASGTIGGLLEAASSFDNAVYDGTAGATYDCITYKDCVVKGKFTLRGRCVFGGTQGGAVRITNTKATAMVVDGNFRIEGNAQVTDTPLKGTGYIGGNAELKNGNVEGYIYMQDNAKYIPAAVTNPPAIRRLIMSGNTKVLKQRDAASGMMNLVMSDNAVLDAAVGFVGDLIMMGDSRIVRPDLNSAATIYGTLVLKDRARIEGTASVDARGEISLVGNFAASGARTIIGKRTISDVSEITAVELPMTKKTW
Physico‐chemical
properties
protein length:660 AA
molecular weight: 69672,29100 Da
isoelectric point:8,51984
aromaticity:0,07576
hydropathy:0,02712

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG65085.1
1 660
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1144
Central domain 11 649 640 0,9052
C-terminal 650 660 10 0,3879
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-649
C-terminal
650-660

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage SJC12
[NCBI] 		2710509 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides thetaiotaomicron
[NCBI] 		818 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG65085.1 [NCBI]
Genbank nucleotide accession
MT074150.1 [NCBI]
CDS location
range 2476 -> 4458
strand +
CDS
ATGATTAAGAAGTACGAACTAGTAGATGAATCCGGAAGGAAGCGGTTACGCGCTCTTCGGAGCTTCTCAGTACAAGGACGTGAGGTAAACGTCCACGACCTAGGCGGATACGTCTACGACGATAAGACGCTATCACAGGATGGTAACTGTTGGATATTCAGCGGATCGCTGGAATACCCCGGTGTACGTGTTATGGATGAGGCTATCGTGGATATGGGGACCAACCTCGCTTCTCCGGTTACGGCCAGGATGAAGAGCGTGGTTATCAGCGGTAATTCCCGTATTATGGGACCCATTCAGTTTACGGGAGCCGAGACTACCAGTCAGGCAGGCATCGTTTGGGAACAAGGCGGGTACACCGCAACGGTGGGAATGATACCCGTTAAGGCTTCCGACGGCTCGCGAATCCGAATTCCTGCCTCCGTATTTGGGGGTTCTGTGGGAGCGGTGTCTATCACGAGCGCAGCGCACGAGGCGAGAATAATCTCTCTTGACTCGGACGGGCTTGTAACGGACGGAGGAACTTGGACCGCAGGAGGACCCGCGGTTACCCTTACAACGACATCACCGAATTTCTTGGTAGAGGTGAGAAAGACCCCGTCCGGAGCTATCACCCCGGCAGACGTAGCGACGGCGGGTGTGACGGTAACCACGGCTTTGGAGACTAGCCTAGAGGTTACTAACTCGTCCATCATCACCTTGTACGATGGCGCGATAGCGAGCAGTGCGAATGCCCTTGCTTTTCGAGTATTCGATGGTAAAAGCACCATTCGAAACTCGAGTATCCGTATAGAGGCTTTCGCAACGGCTAGTAACGCATTGAACTTCCTAGCGGATTTCGATAAGGTGAATGCTATTTTTACGCCAACAAAGGGATCAGGTGCGATTATTAACGGGATATACATTCGCTCGAATGTCACGGCACCCGGAAGCATGGTATCAACGGGATTCACGAAATCTCGCCAATTCGTCGTTAAGGATTGCCCGGAATTTACGTGGAGTGCTACGGTGTTCCCCGCGATAGCGGATTTCAGGTCTAGCGGAAAGGTATTCACATTCAACCGCTGTAACATGCCCGCAGGTTCGGCGATCCATTACTACGACCCGAAGGTGAACGTATGGGATAACATCGACTTTACTAAAGCCATGGCGGACTTAGGGAAAGAGGCGTTCGTAGGTACTACTATCATATCATCCAATGTACAGGGGATGTACCGTGCCAAGGGAAATGCTAGTGGCACAATCGGAGGTCTGCTAGAGGCGGCGTCCAGTTTCGACAACGCGGTCTATGACGGCACGGCGGGTGCGACCTATGATTGTATCACCTACAAGGATTGCGTTGTCAAAGGTAAATTCACGCTCCGTGGCCGCTGCGTATTTGGCGGTACACAGGGCGGCGCAGTCAGGATTACCAACACAAAGGCAACGGCGATGGTGGTTGACGGAAATTTCCGGATCGAAGGGAACGCGCAGGTAACCGATACGCCTCTCAAAGGTACAGGGTACATTGGCGGGAACGCAGAATTGAAGAACGGAAATGTAGAAGGATACATTTACATGCAAGACAATGCGAAGTATATTCCGGCAGCGGTTACGAATCCGCCTGCTATTCGAAGGTTGATAATGTCCGGGAACACGAAAGTATTGAAACAACGGGATGCGGCATCAGGCATGATGAACCTAGTTATGTCGGATAATGCGGTTCTTGATGCGGCTGTCGGATTCGTAGGAGACCTTATAATGATGGGGGATTCTCGTATCGTGAGGCCCGATTTAAATAGTGCAGCCACCATCTACGGGACCCTTGTACTAAAAGATAGAGCAAGGATAGAAGGGACAGCCTCGGTAGACGCTAGGGGTGAGATAAGCCTGGTAGGAAACTTCGCTGCTTCGGGCGCAAGAACTATCATAGGTAAGCGAACTATTTCAGACGTCTCAGAGATCACAGCAGTAGAATTACCTATGACCAAAAAGACTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a1d5e16865497ff7370559d15d6716a9260b9e37f642f5c30d84d053939c8643
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4317
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank