Protein

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UniProt accession
A0A8S5QAE2 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MEKTIEKHLTITSVYRDVEKLGHEIYSQDKGTATFKFTVDKLTASKVLCLFYFKYTKRYITVEAIISENTITVPFDSTLIIADEPVVGYVYFEKVEQSTDVYSFAFNVWVSAIDKAKKTPLVERTTGRIVDVANIVTKQELDELFTKIKEQGGTYDDRNLRTEIGRISTEIETLKTKTDKDTIYDDSALKQRISALESKPNIDTSNLATKDELRNISLMPGPKGDKGETGERGPIGLTGPQGLTGPKGEAGERGPQGDAGPRGADGLQGPMGPQGLQGERGQDGQRGERGEQGPIGQTGPAGPQGIQGERGPKGDDGIQGPPGPKGADGVGIPQTLSLSGNTLTLSHGGGTVNLPASSQNAPTPSTSSSELIGEGMPNGKVDGTIGQTYVDTKKTNGALKWIKRTASGNQGWFVLDGDTGWKKLNILSKLGNSYMQVRRVNYNVYYQFGGLQWGWFGIVRRGNPAFIAHPGNREKKCFIIANGGIPLGYRTSGSLIGQIFNDDGVPYGTWYVGGYGDANHMRFQFNDPVPTDKDIGDIRVSNITYITDDPWPAV
Physico‐chemical
properties
protein length:554 AA
molecular weight: 59999,47420 Da
isoelectric point:6,09998
aromaticity:0,08123
hydropathy:-0,55578

Domains

Domains [InterPro]
DC_0885
STR
1–269
DC_0885 IPR008160
IPR050149
Unmapped
220–365
IPR050149
DC_0554
STR
252–554
DC_0554
G3DSA:1.20.5.320
STR
302–348
G3DSA:1.20.5.320
A0A8S5QAE2
1 554
Architecture
STR
STR 1-554
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctfR912
[NCBI] 		2825596 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE15890.1 [NCBI]
Genbank nucleotide accession
BK015614 [NCBI]
CDS location
range 996 -> 2660
strand -
CDS
ATGGAAAAAACAATCGAAAAACATTTAACTATTACGTCTGTTTATCGAGACGTTGAAAAATTAGGGCATGAAATTTACAGTCAAGACAAAGGTACCGCAACATTCAAATTTACTGTTGATAAATTAACGGCTTCAAAAGTTCTTTGCTTGTTTTATTTCAAATATACAAAACGATATATAACTGTTGAAGCTATAATCTCAGAAAATACAATTACAGTTCCATTCGACAGTACTTTAATCATTGCCGATGAGCCTGTGGTTGGTTATGTATATTTCGAGAAGGTAGAACAATCTACCGACGTTTACTCATTTGCATTTAATGTATGGGTTAGTGCTATTGATAAAGCAAAAAAAACACCGTTAGTCGAACGCACGACAGGCCGCATTGTAGACGTTGCAAATATTGTAACGAAACAAGAATTAGACGAACTCTTTACAAAAATCAAAGAGCAAGGTGGCACTTATGACGATAGAAACCTGCGTACTGAAATCGGGCGAATTTCAACCGAAATTGAGACTTTAAAGACAAAGACGGATAAAGACACTATATATGATGATAGTGCCTTGAAACAACGTATATCAGCACTAGAATCAAAACCAAATATCGACACAAGTAACCTTGCTACAAAAGATGAATTAAGAAACATCTCGTTAATGCCAGGGCCAAAAGGTGATAAAGGCGAAACTGGCGAACGTGGGCCGATAGGATTGACAGGACCGCAAGGATTGACTGGACCTAAAGGAGAAGCTGGGGAACGCGGACCTCAAGGAGATGCTGGGCCAAGAGGAGCAGACGGACTCCAAGGACCAATGGGACCTCAAGGTTTACAAGGAGAACGAGGGCAAGACGGACAAAGAGGCGAACGTGGGGAACAAGGACCAATCGGACAGACTGGGCCTGCCGGACCACAAGGTATCCAAGGTGAACGCGGACCGAAGGGTGACGACGGTATTCAAGGACCTCCAGGACCTAAAGGCGCTGACGGAGTCGGCATTCCGCAAACACTATCGCTTAGCGGTAACACGCTAACACTATCTCACGGTGGTGGAACAGTAAATCTACCTGCTTCCAGTCAAAATGCACCTACTCCATCAACTTCCTCTAGCGAACTAATCGGCGAAGGAATGCCAAACGGTAAAGTCGATGGTACTATCGGACAGACATACGTTGACACCAAGAAAACTAACGGAGCTTTGAAATGGATTAAACGTACAGCGTCAGGTAACCAAGGTTGGTTTGTGTTAGACGGTGATACAGGTTGGAAAAAACTAAACATACTGTCTAAATTAGGTAATTCTTATATGCAAGTCCGAAGAGTTAATTATAACGTATATTATCAATTCGGAGGACTACAATGGGGTTGGTTCGGAATTGTTAGACGGGGTAATCCAGCATTCATCGCACATCCAGGGAACCGTGAAAAGAAATGCTTCATTATAGCAAACGGCGGTATACCTTTAGGATATAGAACGTCTGGTTCGCTAATCGGTCAGATTTTCAACGATGACGGCGTTCCATACGGGACATGGTATGTAGGCGGTTATGGTGATGCAAATCACATGCGTTTCCAATTCAACGACCCAGTACCAACCGATAAAGATATCGGAGACATAAGGGTGTCTAATATAACTTATATTACAGACGACCCTTGGCCAGCAGTATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
faba0380d4095e9f5a92908ef74f7c60c41df697320b95f07440735d6bf018ae
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7663
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50