Protein

View in Explore
Genbank accession
AUZ95498.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MADLVPNAVNPPIKTLLTETHTTDKAVQASADQRKLPPHTHTIAQVTGLQTALDGKQDKA
Physico‐chemical
properties
protein length:60 AA
molecular weight: 6398,17760 Da
isoelectric point:6,81337
aromaticity:0,00000
hydropathy:-0,50167

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PMBT28
[NCBI] 		2081904 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Senftenberg
[NCBI] 		28150 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUZ95498.1 [NCBI]
Genbank nucleotide accession
MG641885.1 [NCBI]
CDS location
range 6094 -> 6276
strand +
CDS
ATGGCAGACTTAGTACCGAACGCAGTCAACCCGCCTATCAAGACGCTGTTGACTGAGACCCACACCACCGATAAGGCGGTACAGGCGAGTGCGGACCAGCGTAAGCTCCCGCCTCATACTCACACCATCGCGCAAGTCACTGGGCTGCAGACCGCCCTCGACGGCAAACAGGATAAGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0366824d81cb691fa5336cf8e6e151a012a784b0aaa9e4aa3f613f3a8263630f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7104
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of the Novel Virulent Phage PMBT28 with Lytic Activity against Thermotolerant Salmonella enterica subsp. enterica Serovar Senftenberg ATCC 43845 Koberg,S., Brinks,E., Albrecht,V., Neve,H. and Franz,C.M. 2018 29954894 GenBank