Protein

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Genbank accession
AZB66801.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
Protein sequence
MYERWLKIIDNGKEELINESAPFFFLDANMDFPNANENDVTIAGVDGVLPGSLSYAPFNLILRFGLDAYDLEEFWLYEHMLRSKFSRRKPFTIIHSQLPGVKFDISKCDISKNIKDGSSCEFEVTCKVYKGYYESVYETDTEFKMSEGWMLESGIPLDFTPKYKHKSKSFVIWNGSTDTIDPRMHHKLKIYIQLTASKGFELINHTTGDVFKYKKSIEKDELVLSSVYAYRNGERCGIDTNRGVITLAPGKNDFEIKGNVSIEKVQFKFPFIYR
Physico‐chemical
properties
protein length:274 AA
molecular weight: 31690,78600 Da
isoelectric point:6,11755
aromaticity:0,13869
hydropathy:-0,38942

Domains

Domains [InterPro]
IPR008841
STR
12–102
IPR008841 DC_0197
AZB66801.1
1 274
Architecture
STR
STR
STR 12-102 | STR 135-274
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZB66801.1
1 274
Domain Start End Length (AA) Confidence
N-terminal 1 255 255 0,6824
Central domain 256 263 9 0,0038
C-terminal 264 274 10 0,8999
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-255
Central
256-263
C-terminal
264-274

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage phiSP119-2
[NCBI] 		2491317 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus pseudintermedius
[NCBI] 		283734 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZB66801.1 [NCBI]
Genbank nucleotide accession
MK075005.1 [NCBI]
CDS location
range 30930 -> 31754
strand +
CDS
TTGTATGAACGATGGCTTAAAATTATTGATAATGGCAAGGAGGAGTTGATAAACGAGTCAGCTCCTTTCTTTTTTCTAGATGCAAACATGGACTTTCCTAATGCTAATGAAAACGATGTTACTATTGCTGGTGTTGATGGTGTGTTACCAGGTAGTTTATCTTATGCTCCGTTTAATTTAATATTGCGATTCGGTTTGGATGCTTACGATTTAGAGGAATTTTGGTTATACGAGCATATGTTAAGGTCTAAGTTTAGTAGAAGAAAGCCATTCACAATCATACATTCGCAATTGCCAGGTGTTAAATTTGATATATCAAAATGTGATATATCTAAAAATATTAAAGACGGTTCATCATGTGAATTTGAAGTCACTTGCAAAGTTTATAAAGGTTATTATGAATCTGTTTATGAAACTGATACTGAGTTTAAAATGAGTGAAGGTTGGATGCTTGAAAGTGGCATCCCTTTGGACTTTACGCCGAAATACAAACACAAATCAAAAAGTTTTGTGATATGGAATGGTTCAACTGATACTATTGATCCAAGAATGCATCACAAGTTAAAAATTTATATTCAACTGACAGCATCAAAAGGATTTGAGTTAATCAATCATACAACTGGTGATGTATTCAAATACAAAAAATCAATTGAGAAGGATGAATTAGTCTTAAGCAGTGTGTATGCATATCGTAATGGTGAAAGGTGTGGCATTGACACAAATAGAGGTGTCATTACTTTAGCGCCTGGCAAAAATGATTTTGAAATAAAAGGTAATGTATCTATTGAAAAGGTGCAGTTCAAATTCCCTTTTATTTACAGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
27a0f9380cb3f833ecfbb0a4451cf202006ca168d074754e05f2b6f715af2e1b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9214
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophage of Staphylococcus pseudintermedius Wipf,J.R.K., Deutsch,D.R. and Fischetti,V.A. 2014-10 — GenBank