Protein

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Genbank accession
YP_009841905.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MFDDTTSTCWLVKNATGKVVSYSRSQDTLVVVTSTGTFKLNRAKAVDMELLFKSEQHLQYYYDLLGNWDDAFFMAQVNVFLKGYSPRIILPVAEITITRPILNGVALGDKIHATYPELNFYNPTTGNYLAAWPLIIHGTYRKQQDGGLGGYSGSQIIFRGCNNRADMTWTQWAIIHSGPNPNEVGQLRRTDSLLKNWPAFADLRDFNIRAINKDGVPISNVHGMYFHYGTQVSAVNMSIYQCYGAGVAVDNTWDSKFENLKILQCGRMSPVFGQYVTDGNFGSQYQTYAPIHVMRSPLSDNSNFIRFHNCHVEDNMHASVDVIVSGNSSPVWLTDLHVEAQSGLGGTTNSGQRTIIGLGNFGVTYFGQDAQPGYDYKARPDTGTGGNVVWTGGGMYSDTYSHIARMTRYSALVLSDMVFPNSGNINVVGGNASPYVYLSNCVVGDISFTGGNGSLSPLKASNCRIKSLTMDYTYGPQLSNCEISGAFNITNMYSNKPEGGVQLTNCNIGSMSGVIQFGQGIVTLTSTTDPSPFVVYYGHIDISRYAYYNTNNLVGG
Physico‐chemical
properties
protein length:556 AA
molecular weight: 61023,78930 Da
isoelectric point:6,34303
aromaticity:0,11691
hydropathy:-0,19442

Domains

Domains [InterPro]
IPR011050
STR
129–336
IPR011050
DC_1709
STR
146–556
DC_1709
YP_009841905.1
1 556
Architecture
STR
STR 129-556
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009841905.1
1 556
Domain Start End Length (AA) Confidence
N-terminal 1 69 69 0,9732
Central domain 70 543 475 0,9913
C-terminal 544 556 12 0,7356
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-69
Central
70-543
C-terminal
544-556

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaA_3M
[NCBI] 		2419930 Uroviricota > Caudoviricetes > Pantevenvirales > Miltonvirus > Miltonvirus 3M
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009841905.1 [NCBI]
Genbank nucleotide accession
NC_048736.1 [NCBI]
CDS location
range 36221 -> 37891
strand +
CDS
GTGTTTGATGACACGACTTCCACCTGCTGGCTCGTCAAGAACGCCACCGGTAAAGTGGTGTCCTATAGCCGTTCCCAAGACACTCTTGTTGTCGTCACCTCAACCGGAACATTCAAGCTGAACCGGGCCAAGGCCGTAGACATGGAATTGTTGTTCAAATCAGAGCAACACCTCCAATACTACTATGACCTGCTGGGGAATTGGGACGACGCGTTCTTCATGGCGCAGGTGAACGTGTTCCTCAAGGGGTACTCCCCGAGGATCATCCTGCCTGTGGCAGAGATTACCATCACCCGCCCTATCCTGAACGGGGTTGCCCTCGGTGACAAAATCCATGCCACGTACCCAGAGTTGAACTTCTACAACCCAACCACCGGCAACTACCTCGCTGCTTGGCCGTTGATCATCCATGGCACCTACCGTAAACAGCAGGATGGTGGTCTTGGCGGCTACAGCGGCTCTCAGATCATATTCAGAGGTTGTAACAACCGCGCGGACATGACCTGGACGCAGTGGGCGATCATTCACAGTGGTCCCAACCCAAATGAAGTTGGGCAATTGCGTCGAACCGATTCTCTGTTGAAGAACTGGCCGGCATTTGCTGACCTGCGCGATTTTAACATCCGCGCGATAAACAAAGATGGCGTCCCGATCTCTAACGTCCATGGCATGTATTTCCATTATGGGACTCAGGTGTCTGCGGTCAACATGTCTATCTACCAGTGTTATGGTGCTGGCGTCGCCGTGGACAACACCTGGGACTCCAAATTCGAGAACCTGAAGATCCTGCAGTGCGGTCGCATGTCTCCTGTGTTTGGACAATATGTGACTGACGGCAACTTCGGTTCCCAATATCAGACCTATGCCCCGATTCACGTGATGCGCTCCCCGTTGTCTGATAACAGCAACTTCATCCGTTTCCACAACTGCCATGTCGAAGATAACATGCACGCTTCAGTAGACGTGATCGTGTCTGGTAACTCATCTCCAGTATGGTTAACGGATCTACACGTGGAGGCACAGTCGGGTTTGGGCGGTACTACCAACAGCGGCCAGCGAACTATCATCGGCCTGGGCAACTTCGGTGTGACCTACTTTGGCCAAGACGCCCAACCGGGTTATGATTACAAGGCGCGCCCGGATACCGGTACTGGTGGCAACGTCGTTTGGACTGGTGGTGGCATGTACTCAGACACGTACAGCCACATCGCCCGTATGACCCGCTATTCGGCCCTCGTGCTGTCAGACATGGTATTCCCTAACAGCGGAAACATCAATGTTGTTGGCGGCAACGCGTCTCCATACGTGTATCTGTCCAACTGCGTTGTCGGTGATATCAGCTTCACTGGAGGTAACGGTTCCCTGTCTCCTCTGAAGGCCAGCAACTGCCGTATAAAATCCCTGACCATGGATTACACCTATGGCCCACAGCTGTCTAACTGTGAGATTTCTGGCGCATTCAATATCACGAATATGTACAGCAACAAGCCAGAAGGCGGTGTACAACTGACCAACTGCAATATCGGTTCCATGTCAGGTGTGATCCAATTCGGTCAAGGTATTGTCACACTGACTTCTACCACTGACCCTTCACCGTTTGTGGTCTATTACGGTCATATCGACATATCTCGTTATGCCTATTACAACACGAATAATTTGGTAGGTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf90cbf0070d6b5f4f3be62913b6bdb99c3204d3f047eb22eb081fa867e20852
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6777
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50