Protein

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Genbank accession
AHV82127.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYGTVKVDNITFDNGGSDQNVTVSGLYRATTSGVTVSGTIVAATVSGVTIIGSTTVSGATVTGTTANFTSGNFSNIISSAATMSGALIMANQQQVRFREAVGNGVNHIALQAPAIVSADQTITLPDQTGTVVTTGDNGSVTSTMILDGAILNVDINASAGIVDTKLATIATAGKVSNSATTATNANTASAIVARDASGNFTAGTITAALTGAASSNVLKAGDTMTGVLAVTAGTAALPGLAIASDTNTGIYSPGADQLAVSTGGTGRLFIDASGNVGVGTSSPGYALQVKGGGASGTLSLSGGSEVTGGASSILMGNNDSGGVTGPCIIRAANRELLFGVGSSFTASAGGTFTERLRIDSSGNVGIGTSTPAASLDIAGNQLFSAANPQIQFNAGGPIIRLPSGNTLAFLTDSTTERMRIDSAGNVLVGTTNTSPANNNVAGTAINSVVTEISRSAGIALYLNRDTSNGNTAAFNRAGVTVGAISVTTTATAYNTTSDYRLKENITPLDGAIARLNQLPVHRFNFIADPDTVVDGFIAHEAQVVVPECVTGEKDGVDEDGNPIYQGIDQSKLVPLLTAALQEAIARIETLEAAVTALQGA
Physico‐chemical
properties
protein length:601 AA
molecular weight: 59803,64170 Da
isoelectric point:4,55703
aromaticity:0,03993
hydropathy:0,18536

Domains

Domains [InterPro]
DC_1815
STR
293–402
DC_1815 IPR030392 Coil
DC_1367
RBD
382–601
DC_1367
IPR030392
CHP
498–595
IPR030392
AHV82127.1
1 601
Architecture
STR
RBD
STR 293-402 | RBD 403-601
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AHV82127.1
1 601
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,9003
Central domain 12 210 200 0,3847
C-terminal 211 601 390 0,8429
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-210
C-terminal
211-601

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-EIVl
[NCBI] 		1468179 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHV82127.1 [NCBI]
Genbank nucleotide accession
KJ410740.1 [NCBI]
CDS location
range 768 -> 2573
strand +
CDS
ATGGCGTACGGTACTGTAAAAGTTGATAATATTACTTTTGATAACGGTGGTTCTGATCAGAACGTAACGGTATCTGGCCTCTATCGTGCTACGACTAGTGGTGTAACTGTCTCTGGAACTATTGTAGCTGCCACTGTTTCTGGTGTTACCATCATTGGTAGTACAACTGTTTCAGGCGCCACGGTCACTGGTACCACGGCGAACTTTACTAGTGGAAACTTTAGTAACATAATCAGTTCTGCCGCTACCATGAGCGGTGCGCTGATAATGGCTAACCAGCAGCAGGTCCGATTTAGGGAAGCTGTTGGTAATGGGGTTAATCATATTGCGTTACAAGCACCAGCGATTGTTTCCGCTGATCAAACTATTACACTGCCCGATCAAACAGGAACGGTAGTAACTACTGGTGACAATGGTAGTGTAACGAGCACAATGATCCTGGATGGGGCCATCCTTAACGTTGACATCAATGCCTCTGCTGGTATTGTTGATACCAAACTGGCAACCATTGCCACCGCCGGTAAGGTAAGTAATTCAGCCACCACGGCTACTAATGCCAACACTGCTTCAGCTATCGTTGCTCGTGATGCCAGTGGTAACTTCACTGCAGGCACCATCACTGCAGCATTAACTGGCGCTGCATCTAGCAACGTACTCAAGGCCGGCGACACCATGACAGGTGTGTTGGCCGTAACTGCCGGCACTGCTGCACTACCTGGCCTGGCCATAGCTAGCGACACCAACACTGGCATCTACAGCCCTGGTGCAGACCAACTAGCAGTCAGTACAGGCGGCACGGGACGGCTGTTTATTGATGCGAGTGGGAATGTTGGGGTTGGGACTAGTAGTCCTGGGTATGCGCTACAGGTAAAGGGTGGTGGTGCATCAGGGACACTAAGCCTTTCTGGAGGATCCGAAGTCACGGGAGGGGCAAGTAGCATACTAATGGGAAATAACGACTCCGGAGGTGTAACTGGCCCCTGTATCATTAGAGCTGCAAATAGAGAATTGCTGTTTGGTGTTGGTAGCAGTTTTACTGCCAGCGCCGGAGGTACGTTTACCGAACGCCTCCGCATCGACAGCTCCGGCAACGTGGGGATTGGGACTAGTACGCCTGCAGCATCCTTGGATATTGCAGGAAACCAATTATTTTCTGCGGCCAATCCGCAGATTCAATTTAATGCTGGTGGCCCCATTATTCGGTTGCCTTCAGGAAATACCCTTGCATTTTTAACTGATAGCACAACGGAGAGGATGAGGATTGATAGTGCGGGCAATGTGTTGGTAGGGACGACGAATACATCACCTGCAAACAACAACGTAGCCGGAACGGCCATCAACTCAGTTGTTACTGAAATTAGCCGAAGTGCCGGGATTGCATTGTACTTAAACAGGGACACAAGTAACGGAAATACCGCCGCGTTCAATAGAGCCGGCGTAACAGTAGGCGCCATCTCCGTCACCACTACCGCTACTGCATACAACACCACCTCCGACTACCGCCTCAAGGAAAACATCACGCCCCTTGATGGCGCCATCGCTCGCCTCAACCAGCTCCCCGTTCATCGGTTTAACTTTATTGCCGATCCTGACACCGTAGTAGATGGCTTCATCGCCCACGAAGCGCAAGTCGTTGTTCCTGAGTGTGTCACTGGTGAAAAGGATGGAGTAGACGAAGATGGCAACCCCATTTACCAAGGCATTGACCAATCCAAACTGGTACCCCTGCTGACGGCTGCATTGCAAGAAGCCATTGCCCGCATCGAAACCCTTGAAGCTGCCGTTACAGCGTTGCAAGGCGCCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0b887f4e824341a2cfc80fd9a0c87a9d2d9adca4b6e770505746ab718fc46201
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6707
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Polar freshwater cyanophage S-EIV1 represents a new widespread evolutionary lineage of phages Chenard,C., Chan,A.M., Vincent,W.F. and Suttle,C.A. 2015 25822482 GenBank