Protein

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Genbank accession
YP_009798040.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANVIKTVLTYQLDGSNRDFNIPFEYLARKFVVVTLIGVDRKVLTLNTDYRFATRTTISLTKSWGPADGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTADTIGVNNDGHLDARGRRIVNLANAVDDRDAVPLGQLKTMNQNSWQARNETLQFRNDAEGFRNDAERFMNSASASSDSANSAKDAAHQSNVEAYQHRLAAETAKTAAQQSNVESYTWSNKSKEYAESASMDAAKAEQQANRAKTEADKLANTNAFAATLKTVQGGTVEWHKEWGLKANSFDALSDITALNGTMNSMDVRASRNVAVAGVTYPQGGIQQTIGTNQWNHLVRLHINGRPSWVGDKQGLHLAWNENGSGEADLICNQGAGAGGFLFRTVNDKDNVEIGRVTFTGAGAVHANHFQVGHSRMESNGNVVAGSVLYAGNGSSQMAPDGNVHGPLWGGWLSSYLNNRYLFAKPPGGVQLFTSRGGDYLEGVVDNQAVGFRWFLSDRRLKENINVLRSADDMLNIIRSYIPVTYKYKDSEYTDNRGRTITVTGKKSRAGFITQDLIRIWPEAVDVLSDGMQSPDPNQIIGGLMLLVKNLDERVQELEKKNNV
Physico‐chemical
properties
protein length:611 AA
molecular weight: 67227,96440 Da
isoelectric point:6,34195
aromaticity:0,07856
hydropathy:-0,48020

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil G3DSA:6.20.70.20 IPR030392 Coil
DC_0264
STR
1–604
DC_0264
IPR030392
CHP
504–609
IPR030392
YP_009798040.1
1 611
Architecture
ATT
STR
ATT 1-131 | STR 132-609 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009798040.1
1 611
Domain Start End Length (AA) Confidence
N-terminal 1 168 168 0,9807
Central domain 169 368 201 0,5895
C-terminal 369 611 242 0,8487
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-168
Central
169-368
C-terminal
369-611

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage HZ2R8
[NCBI] 		2079317 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teseptimavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009798040.1 [NCBI]
Genbank nucleotide accession
NC_047923.1 [NCBI]
CDS location
range 37599 -> 39434
strand +
CDS
ATGGCTAACGTAATTAAGACCGTTTTGACTTACCAGTTAGATGGTTCGAATCGAGATTTTAACATCCCGTTTGAATATCTAGCCCGTAAGTTTGTAGTGGTAACTCTCATTGGTGTTGACCGTAAGGTCCTCACACTCAATACAGATTATCGCTTTGCTACGCGTACTACTATCTCGCTAACCAAATCTTGGGGACCTGCGGATGGTTACACTACCATTGAGCTGCGCCGAGTAACCTCCACGACTGACCGTCTGGTTGACTTTACGGATGGCTCGATCCTGCGTGCGTATGACCTTAACGTGGCTCAGATTCAGACTATGCATGTGGCAGAAGAGGCCCGTGACTTAACTGCTGATACTATTGGTGTCAACAATGATGGTCACTTGGATGCCCGTGGTCGTCGTATCGTGAACCTAGCGAACGCTGTGGATGACCGTGACGCTGTTCCGCTTGGTCAACTAAAGACGATGAACCAGAACTCTTGGCAAGCTCGCAATGAGACTCTACAGTTCCGTAATGACGCTGAGGGTTTCCGTAATGACGCTGAGCGGTTCATGAACTCTGCTAGTGCTTCGTCTGATTCGGCTAACTCCGCTAAGGATGCGGCCCATCAATCCAACGTGGAAGCGTATCAACATCGCCTTGCTGCGGAAACAGCTAAGACCGCTGCTCAGCAGTCAAACGTAGAGTCGTACACTTGGTCTAATAAGTCCAAGGAGTACGCCGAGTCTGCCTCTATGGATGCTGCGAAAGCTGAGCAACAAGCTAACCGCGCTAAGACCGAGGCTGACAAACTAGCTAATACCAACGCGTTTGCTGCTACCTTGAAGACAGTTCAGGGTGGGACCGTTGAGTGGCACAAAGAGTGGGGACTCAAGGCTAACAGCTTCGATGCACTCAGTGATATTACTGCCCTAAACGGTACGATGAACTCTATGGACGTTCGAGCGTCTCGTAACGTAGCAGTAGCTGGTGTGACTTACCCTCAGGGGGGCATTCAGCAGACTATCGGTACTAACCAGTGGAACCATCTTGTACGGCTGCATATTAACGGTAGACCAAGCTGGGTGGGGGATAAACAAGGACTCCACTTAGCATGGAACGAGAATGGAAGTGGTGAGGCAGACTTAATCTGCAACCAAGGTGCTGGGGCTGGAGGCTTCCTCTTTAGGACTGTGAACGACAAGGACAACGTAGAGATTGGTCGTGTCACCTTTACTGGTGCTGGTGCTGTGCACGCTAACCACTTCCAAGTCGGCCATAGTCGCATGGAGTCCAACGGGAACGTAGTGGCTGGTAGCGTACTGTATGCTGGGAATGGTTCCAGTCAAATGGCTCCAGACGGGAACGTCCATGGTCCTCTTTGGGGCGGCTGGCTGTCCAGCTACCTGAACAATAGGTACCTTTTCGCTAAGCCGCCTGGAGGGGTTCAGTTATTTACCTCTCGCGGTGGGGACTACCTTGAGGGCGTTGTGGATAACCAAGCCGTTGGGTTCCGGTGGTTCCTATCAGACAGAAGGCTTAAGGAAAACATAAATGTTCTACGCTCAGCCGACGATATGCTAAATATCATCCGGTCGTACATCCCAGTCACGTACAAGTATAAGGATTCGGAGTATACTGATAACCGTGGGAGAACTATTACTGTTACTGGTAAGAAGTCTCGTGCAGGCTTCATTACTCAGGACTTGATTAGAATCTGGCCCGAAGCAGTGGATGTTCTATCGGACGGTATGCAGTCCCCAGACCCTAACCAAATCATCGGTGGACTAATGCTTCTTGTTAAGAACCTAGATGAGCGGGTTCAGGAGCTAGAGAAGAAGAATAACGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
27f7881dede6497410dd853d30c2ab587f9ca55e6483fedeec36e196651280f9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6705
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50