Protein

View in Explore
Genbank accession
UJD05398.1 [GenBank]
Protein name
long tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,97
Protein sequence
MADQNLKQIQFKRSSTENKAPSADIVARGEIALNTHGRTLAIYTKDENDAVVQLAGKGVPFLDTSGTLNVDGTTTLKDNVTVAPNKSISFETTDLSGEITRHIVGKCAANDGWYIGAGGTSNSGILEIGTIDDGVETIQFVQRGAGNVEARKLVLLDSSGSTTLPGDLRLTTNKTVKISNGSTLTLEMGVGANDAYIKNLRGSGVLQLTNDSNLTFRNYQVYYAMGGKGPGKDGTLLTNVENERQLKQDNFPVTTGSEVRWTKVALLKDPGSSQSRLQLMVTNGGNYGSTYSSVDFIDCSARNFPTSLTSSNIRNHLQIRRLGNPALDDTNQLRYSLILTSEGLELWFTQRAFIGGVKVALLSIAGGTEYYLPNGYTSSSTAPEGLVESTAIRIYDEFNKPNIDGGTEGILPISRGGTGGTSSAAARNNLGLGTAAIRDVGESTGNLLENGAYGLGGNGGKSINDIISNADMLTRLKSYGGTFWRGVTKSGVSVQNGLYSHGSGIFMNAGDTMSAINIDYASAKVRVYAANNSGLAAGNVNYNELYGTANKPSKADVGLGNLTNDTQVKKAGDTMTGDLTVPNLHASGTGTASVYVNAGTGNAHVWFRTDGNERGVIWATPNTTDLGQINIRAKTTAGVSAGDFSFRSDGRLDVPVAVKIGGAAMLTKDGNITSGSMFGGNLNNYLTSIKNDITAGDSKQVSKTGDTMTGNLTINANLKVENPNGTMVDLGSENSEKYSRLTLARKVGDGATVAMLKVTPEGHVQFGYQTAVSTPAPSKYILVKSSGLEVEGDLVFNQTYSGSEEAVDISDKTVDLNSLVIKKSGLGTRQLYKCMSSGGGNNISNKPTSDGNFVLEVLSLRKVSETDWSCKQTFTTKNGGVEGTYIRYAQNGSWSAWKEVVAGVQPINLGGTGATSVAAARNNLGIGEGQTTTFGGLVVNGIGNNDPVVTFKNGAIIREAQGGSTGALIMSASTTATAAAKYIAFRPFGDSSGTEIRVKANGSSEPLLEWSYGPGIRSNSTGAFVIYAKTGQALHLRPNGDSSNQATVIDQNGKMTVGGEFEAQNSKITGNLNVSEDNRMIVLGKNSDIGLVKKNGMPGKMAISKSNSFTVMASTNTNNQINPADTFNDIFKVDADGNQTVYGNAQINRQLSVSSVATVNGIINANGGIIVPTTKYVQIADAPTQNNQATNKKYVDDKVASAISNAGDTYLPLAGGTVTGRLIITGDQLKTTSLWVTGASALNGNLEVGGNVVSNNGIGSFVGAVDVKAPAVDNGTTHLWFRHSNGGERGVIYMPGNNNTMMGLRAASSEWQFHGASGQITGPGARWTLHSDGNLQSSLFTSYGVGGDGYISNWVPGVANKVSNDNIWAWRISQGAFDVGMYIMAATRNEWTGGQEFTPGQTIAGSNLFWTTADGGDWNYGDKRLSGTWMACGFSATTNNIHRTTIWKRIA
Physico‐chemical
properties
protein length:1451 AA
molecular weight: 152611,92200 Da
isoelectric point:7,20346
aromaticity:0,06961
hydropathy:-0,29076

Domains

Domains [InterPro]
DC_1942
ATT
4–605
DC_1942 cd19958 DC_0749
DC_1159
STR
442–1128
DC_1159
UJD05398.1
1 1451
Architecture
ATT
STR
RBD
ATT 4-605 | STR 606-1128 | RBD 1168-1396 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJD05398.1
1 1451
Domain Start End Length (AA) Confidence
N-terminal 1 343 343 0,0790
Central domain 344 542 200 0,1884
C-terminal 543 1451 908 0,7019
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-343
Central
344-542
C-terminal
543-1451

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage PWKp16
[NCBI] 		2863266 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJD05398.1 [NCBI]
Genbank nucleotide accession
MZ634347.1 [NCBI]
CDS location
range 20325 -> 24680
strand -
CDS
ATGGCCGATCAGAACTTAAAACAAATACAATTTAAAAGAAGCAGTACAGAGAATAAAGCACCTAGTGCCGATATCGTAGCTCGTGGCGAAATCGCATTGAATACCCATGGTCGTACTCTTGCCATTTATACTAAAGATGAAAATGATGCCGTAGTACAGCTCGCCGGTAAAGGCGTTCCATTTTTAGATACTTCCGGTACTCTCAATGTTGATGGAACTACTACATTAAAAGATAATGTTACTGTTGCTCCGAATAAATCGATCAGTTTTGAAACTACTGATTTAAGTGGTGAAATAACTCGACATATCGTAGGCAAATGCGCCGCTAATGATGGGTGGTACATTGGTGCAGGTGGTACAAGCAACAGTGGTATTCTTGAAATCGGTACTATTGACGATGGCGTTGAAACCATCCAGTTTGTACAGCGCGGGGCCGGTAATGTAGAGGCCCGAAAACTGGTCCTGCTTGACAGTTCGGGTAGTACTACTCTTCCTGGTGATTTAAGATTAACTACTAATAAGACTGTAAAAATTTCAAACGGGTCTACTCTTACTTTAGAAATGGGTGTAGGTGCTAATGACGCTTACATTAAAAACTTGAGAGGCTCCGGGGTTCTTCAATTAACTAATGATAGCAATCTGACCTTCAGAAATTACCAGGTTTATTATGCTATGGGCGGAAAAGGTCCTGGTAAAGATGGTACTCTTCTGACGAATGTAGAAAACGAACGCCAACTTAAGCAGGATAATTTCCCTGTAACGACTGGTAGCGAAGTTAGATGGACAAAAGTTGCTCTTTTAAAAGACCCTGGATCAAGCCAGAGCCGCTTGCAACTGATGGTGACTAATGGCGGCAACTACGGTAGTACCTATAGTTCTGTTGACTTTATAGATTGTAGTGCTAGAAATTTTCCAACCTCATTAACAAGCAGTAACATTCGTAATCATCTACAGATTCGTCGTCTCGGTAATCCGGCACTTGATGATACAAACCAACTGCGGTATAGTTTAATTCTTACATCTGAAGGTTTAGAACTGTGGTTTACCCAACGCGCATTCATCGGCGGCGTTAAAGTTGCACTACTATCTATTGCTGGTGGTACTGAATACTACCTGCCTAACGGGTACACGTCTTCTTCAACTGCTCCTGAAGGTTTAGTTGAGAGTACGGCTATTCGTATCTATGATGAATTTAACAAGCCTAACATTGACGGTGGTACTGAGGGTATTCTGCCTATTAGCAGAGGCGGTACTGGCGGCACTTCTTCTGCTGCTGCTCGTAATAACTTGGGTCTAGGTACGGCTGCTATTCGCGACGTCGGCGAATCCACTGGTAACCTTTTAGAAAACGGCGCTTACGGCTTAGGCGGTAATGGTGGTAAATCCATCAACGACATTATCTCTAATGCGGATATGTTGACTCGCTTAAAATCATACGGCGGTACTTTCTGGCGTGGTGTTACTAAATCTGGTGTTAGTGTTCAAAACGGTCTTTATAGCCACGGCTCCGGTATTTTTATGAATGCTGGTGATACCATGTCAGCTATTAATATCGACTATGCTAGTGCTAAAGTTCGTGTATACGCAGCTAACAATAGCGGTCTTGCGGCCGGAAATGTTAACTACAACGAACTTTACGGTACAGCAAATAAACCGTCTAAGGCCGACGTAGGGCTTGGTAATCTGACAAACGACACCCAGGTTAAAAAAGCCGGCGACACCATGACCGGTGATTTGACGGTTCCTAATTTACATGCTTCCGGTACCGGTACCGCATCAGTATATGTTAATGCCGGGACTGGGAATGCACATGTATGGTTTAGAACCGATGGTAATGAACGCGGTGTAATCTGGGCAACTCCGAATACTACGGATTTAGGTCAGATTAATATTCGTGCAAAAACCACAGCTGGTGTTTCTGCGGGTGATTTTAGCTTCCGTTCTGATGGCCGCCTTGATGTTCCTGTAGCAGTTAAAATTGGTGGAGCAGCAATGCTAACCAAAGACGGGAACATTACCTCCGGCTCGATGTTTGGTGGTAACCTTAACAACTATTTGACTTCTATTAAAAACGATATCACTGCTGGCGATAGTAAGCAAGTAAGTAAAACCGGTGACACAATGACCGGCAACTTGACTATTAACGCTAACTTAAAAGTCGAAAATCCTAATGGAACGATGGTTGATTTGGGTTCAGAGAACTCAGAAAAGTACAGCAGATTAACCCTTGCTCGTAAAGTTGGCGATGGCGCTACAGTAGCAATGCTTAAAGTTACTCCTGAAGGACATGTACAATTCGGGTATCAAACTGCAGTTTCTACTCCAGCTCCTAGTAAATATATTCTAGTTAAATCCAGCGGTCTTGAGGTAGAAGGGGATTTGGTTTTTAATCAGACATATAGTGGTTCTGAAGAAGCAGTTGATATTTCTGATAAGACTGTTGACCTTAACAGCCTGGTTATTAAAAAATCCGGTTTAGGCACCCGTCAGCTGTATAAATGCATGTCATCTGGTGGCGGAAATAACATATCTAATAAACCTACATCTGACGGCAACTTTGTTCTTGAAGTTCTGTCTTTGCGTAAGGTTTCTGAAACTGACTGGTCATGTAAGCAGACCTTTACTACAAAGAACGGTGGCGTTGAAGGTACATATATTCGCTACGCGCAAAATGGTTCATGGTCCGCATGGAAAGAAGTTGTTGCAGGTGTTCAACCGATTAACTTAGGCGGCACCGGAGCAACCTCTGTAGCTGCTGCTCGTAATAACCTCGGTATTGGTGAAGGACAAACTACCACTTTTGGTGGATTGGTTGTTAATGGTATTGGAAATAATGATCCAGTTGTCACGTTTAAGAACGGTGCTATAATTCGTGAAGCCCAAGGTGGTAGTACCGGTGCATTAATAATGTCAGCTTCTACTACAGCCACTGCAGCCGCAAAATATATCGCTTTTAGACCCTTCGGTGATTCGTCTGGTACTGAGATTAGAGTAAAAGCCAACGGGTCTAGTGAGCCATTACTTGAGTGGTCTTATGGCCCAGGTATTCGTTCAAATTCAACTGGCGCTTTTGTTATCTACGCAAAAACTGGACAGGCGCTTCATTTAAGACCTAACGGTGACAGCTCGAACCAAGCTACAGTTATCGATCAGAACGGTAAAATGACAGTTGGTGGTGAGTTCGAGGCGCAGAACTCGAAAATCACAGGCAACTTGAACGTCTCTGAAGATAACAGAATGATCGTTCTTGGTAAAAACTCTGATATAGGTTTAGTCAAGAAAAACGGTATGCCAGGTAAAATGGCTATCAGTAAATCTAACTCGTTTACTGTTATGGCATCAACCAATACCAATAACCAAATTAATCCTGCTGACACGTTTAACGACATATTCAAGGTGGATGCTGACGGAAACCAAACTGTTTATGGAAATGCCCAAATCAATAGACAGTTATCCGTTTCTAGTGTAGCAACTGTTAATGGTATTATTAATGCCAACGGCGGTATTATTGTTCCTACTACCAAGTATGTTCAAATTGCCGATGCTCCTACGCAGAATAACCAAGCCACTAACAAGAAATATGTCGATGATAAGGTTGCTTCTGCCATTAGTAATGCTGGAGATACTTATCTTCCGTTAGCGGGTGGTACTGTAACTGGGCGGTTAATAATTACAGGCGATCAGTTAAAAACTACATCGCTCTGGGTTACCGGAGCTTCGGCTCTTAACGGTAATTTAGAAGTAGGCGGTAATGTTGTTAGTAATAATGGTATTGGTAGTTTTGTTGGTGCTGTAGATGTTAAGGCCCCTGCCGTAGATAATGGTACAACGCACCTTTGGTTCCGACATTCTAATGGTGGCGAGCGTGGTGTGATTTACATGCCAGGTAACAATAATACCATGATGGGATTAAGAGCCGCTTCTAGTGAATGGCAGTTCCACGGTGCTTCAGGACAAATTACTGGCCCTGGAGCGCGTTGGACACTGCATTCTGATGGTAACTTACAATCTAGCCTATTCACATCATACGGCGTAGGCGGTGATGGTTATATTAGTAACTGGGTTCCTGGTGTAGCTAATAAGGTATCTAATGATAATATTTGGGCCTGGCGTATTAGTCAAGGCGCATTTGATGTCGGTATGTATATTATGGCAGCTACCCGCAACGAGTGGACTGGTGGTCAGGAATTTACACCAGGACAAACTATCGCGGGAAGTAATCTTTTTTGGACAACAGCTGATGGCGGGGATTGGAATTACGGCGATAAACGCCTTTCTGGTACCTGGATGGCCTGTGGATTCTCTGCTACCACTAATAATATCCATCGTACAACTATTTGGAAAAGAATTGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7871858464539d8ec1166880cfd2f6ef7efec988a7ac48eec5615c60d6413996
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4890
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic Bacteriophages against Mutidrug-Resistant Klebsiella pneumoniae: Development of an Effective Phage-based Approach to Combat Multidrug Resistance Martins,W.M.B.S., Cino,J., Li,M., Lenzi,M.H., Sands,K., Portal,E., Mathias,J., Hansan,B., Dantas,P., Migliavacca,R., Hunter,J.R., Medeiros,E.A., Gales,A.C. and Toleman,M.A. 2021 — GenBank