Protein

Genbank accession
YP_010678896.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,70
TF
Evidence Phold
Probability 1,00
Protein sequence
MNYRVKHYRYRLIDGGYLVRDLKKNTETSLVFTGTYVKSYVQDVGENLINILNNFSYHLPPVSAVTGQLWWKENTRQMYIFPGPNGLDSTNINNWVPITKFEEDAVWAHITNYNNPHLVDKYSVKLDKLENYPIFDISKNFADVLNASSARTNLGVFGKDVTYTKAEADALFLKKTDKAANSNNLNGIPAAKFMKVAAPVANAAINVTPSDGLMSFRSGKSYLESRGISNGLSINNTIATNNSSATILELNNTTLSTSSVFIKLYNRGSLNTAPVLALQYRLSPNQLYIGNNQVFHLGYRPTPAQIGALPVNGKASDSAALDGRINSTLATPGTVVERDSSGAITGRLLRSTGNNTSDQFTRNSKIGFVRSNSNNTMRFTPAQALNEWAGYNTLIKKSKGWISWSGPTGSRLDSWNLTVSKLASGRYRVYLSVPAPDTNYVVVLGNADAMVWNNQLNITEQWVTTKTTTYFDVNCKITKADHIINYNPSGWTNRFGEDYFDAPFFSLVIYY
Physico‐chemical
properties
protein length:511 AA
molecular weight: 56746,10290 Da
isoelectric point:9,41898
aromaticity:0,11155
hydropathy:-0,33327

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_PA5oct
[NCBI] 		2163605 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010678896.1 [NCBI]
Genbank nucleotide accession
NC_071039.1 [NCBI]
CDS location
range 97424 -> 98959
strand -
CDS
ATGAATTACAGAGTAAAACATTATCGATATAGATTAATCGACGGCGGTTATTTAGTCAGAGATTTAAAAAAAAATACAGAAACTTCATTAGTATTTACAGGAACTTATGTAAAATCATATGTACAAGATGTTGGTGAGAATTTAATTAATATATTAAATAATTTCTCATATCATCTTCCACCGGTATCTGCCGTAACAGGGCAGTTATGGTGGAAAGAAAATACAAGGCAAATGTACATATTCCCCGGACCAAATGGATTAGATAGTACAAATATAAATAACTGGGTTCCTATTACTAAATTCGAAGAAGATGCAGTATGGGCTCATATTACTAACTATAATAACCCTCACTTAGTAGACAAATATTCAGTAAAACTAGATAAATTAGAAAATTACCCTATATTTGATATATCTAAAAATTTTGCAGACGTACTGAACGCAAGTTCTGCTAGAACAAATTTAGGTGTTTTCGGTAAGGATGTTACCTACACTAAAGCAGAAGCAGATGCTTTATTTCTAAAGAAAACAGATAAAGCAGCAAACTCGAATAATTTAAACGGAATACCTGCTGCAAAATTTATGAAGGTTGCTGCTCCTGTAGCAAATGCAGCCATTAATGTAACACCATCTGACGGATTAATGTCGTTTAGATCAGGAAAATCATACTTAGAATCTAGAGGTATTTCTAACGGTCTATCTATTAATAATACAATAGCTACTAACAATTCATCAGCTACTATATTAGAATTAAATAATACTACTCTTAGTACATCATCTGTTTTTATTAAACTGTATAATAGAGGCTCACTTAATACAGCTCCTGTTCTGGCATTACAATATAGATTATCTCCAAATCAACTATACATTGGCAATAATCAAGTATTTCATTTGGGATATAGACCGACGCCTGCACAAATAGGGGCTCTTCCTGTTAACGGTAAAGCATCAGATTCTGCTGCATTAGACGGTAGAATAAACTCTACACTTGCTACTCCGGGCACTGTAGTAGAGCGAGATTCCTCAGGTGCCATCACTGGTAGATTGTTAAGATCTACGGGCAACAATACTAGTGATCAATTTACTAGAAATAGCAAAATAGGTTTTGTAAGAAGTAATTCAAACAATACTATGAGATTTACTCCGGCGCAAGCATTAAATGAATGGGCCGGATATAACACTTTAATAAAAAAATCAAAAGGATGGATATCTTGGTCCGGTCCTACTGGCAGTAGACTAGATTCCTGGAATTTAACAGTTAGTAAATTAGCATCGGGTCGATATAGAGTATATCTATCTGTGCCTGCGCCAGATACAAATTATGTAGTTGTATTAGGAAACGCCGATGCAATGGTATGGAATAATCAACTAAATATAACTGAACAATGGGTAACAACAAAAACTACCACATATTTTGATGTTAACTGTAAAATAACAAAAGCAGATCACATAATAAATTACAATCCATCGGGTTGGACTAACAGATTCGGCGAAGATTATTTCGATGCACCGTTCTTCTCACTTGTAATATACTACTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
c3c787e5aafd47a9611bb09bb3e166d7ac1fdd30a1495fb8ee4c90ae699ea9a6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6213
Evidence 0,6213
Download PDB

Literature

Title Authors Date PMID Source
Integrative omics analysis of Pseudomonas aeruginosa virus PA5oct highlights the molecular complexity of jumbo phages Lood,C., Danis-Wlodarczyk,K., Blasdel,B.G., Jang,H.B., Vandenheuvel,D., Briers,Y., Noben,J.-P., van Noort,V., Drulis-Kawa,Z. and Lavigne,R. 2019 — GenBank
Genomics, Transcriptomics, and structural analysis of Pseudomonas virus PA5oct highlights the molecular complexity among Jumbo phages Lood,C., Danis-Wlodarczyk,K., Blasdel,B., Jang,H.B., Vandenheuvel,D., Briers,Y., Noben,J.-P., Kawa,Z. and Lavigne,R. 2019-06-22 — GenBank