Protein

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Genbank accession
UKM62528.1 [GenBank]
Protein name
putative long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,63
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSSIPFRVTDGLDAAGQKIVNVGYPDINSKMDGVSVDFFVQENTIQLYDATRTYDKNFAVIYDNRIYLSQVDITSPEAFNPVKWKPVRTDPSWKLVTTNAPALTNLSAGDHILAQTISSDVTFTLPTNALNGDVIVIRDNGSNLHDYTIDVSGNGRTISGLASYKITAKNSSNYFILNGSEWFVQTEYAGDVNKSFISNKSYPAGGYYKSIVGDQLMRETRYTGGIKIQLPKYARNGDTITTYDLDGNNPVTKTTVNVHPGSSHNIIVEYGSTPMKTVVFDSTDWGMFVFDSSLNAWRVFDADNLSRWKSVKTSTYLGQPNDRLVVYTETPSTVNITFPRDAARGDSFFIDTRYMKRGSTLTLNIDASSTNDFFVPDGNTLMNPRISAYRDFLANMESKTVKTQSFDIQNRGEQWEFVYFTNALGSGKDVWSVVTMSEIPYRVDRNVPEFYGMAAIASQSSVNKNKEEITTGQNPDCEDFVTAETLANKTASTVRRGITRYASNSESKAVSGNLSDEAWSGVAISPFLLNDRLSTTTMRGLLKVATQSQANAQSGSGENWAQVAVTPSTLNGRVATESMTGLSALVSANGTKPTTRTTPGTGVYDYNDHSKVITPKTLFEKNATEFSQGMVYIANQGEVNTGTADTATGALVVTATTLEGRQATASLTGLSRAATSIEVLSNTPPAGDNVHVSAKGLVSRTATETRWGLSETATQAEVDAGTLHDKWFVTPKTFGNWLARERLTVFDTSGLRTVGNIWEGQSFNIVIPTESQRGTARIATQNEVNDMTGTANDEIIVTPKKLSARLATTTQTGLSQIATQSEVDTGTNNTKYLTPLTALTSSRNSAGYRMTDTRYGVGITAILSNNNSANSVFEGNDILGSTRALTGYAHGDVLVSPRGLNTALSNFLPLKAVAVSASAMEVGGNRIPSTDWVRRTIAQTITGEMTFTANPSIEKIRPYFYLNETSTTSHVSMIQWKRQGSNAFLDLGVNTIDGPLVLNAMDENSRYYRVFTVERDGNAIFTNQVQNGGQNPTSGNHLVRFAYAEERYVRGPGNFAETITGNKTFVNTTYFKNSGVQNIWMGNTSKSGITINANESLNIGSLGGLQIRPNGLSSPSNTSSFESNGDLKVNAQVKIGSALPIDPDDAIRKDYLDSVIDDMNTTSGSRVFKGGDTMTGELIINSVKALTVNGDSNLNGTTTVNKLRIAVGNGEFLEIRANPTTKSVDFVWIS
Physico‐chemical
properties
protein length:1230 AA
molecular weight: 133502,77560 Da
isoelectric point:5,67642
aromaticity:0,08374
hydropathy:-0,34504

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UKM62528.1
1 1230
Domain Start End Length (AA) Confidence
N-terminal 1 350 350 0,5801
Central domain 351 617 268 0,1549
C-terminal 618 1230 612 0,4639
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-350
Central
351-617
C-terminal
618-1230

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage P19
[NCBI] 		2914179 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas dhakensis
[NCBI] 		196024 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKM62528.1 [NCBI]
Genbank nucleotide accession
OM339718 [NCBI]
CDS location
range 29713 -> 33405
strand +
CDS
ATGTCTTCAATTCCGTTTCGCGTTACCGACGGCTTAGATGCCGCCGGTCAAAAAATAGTTAACGTCGGTTATCCCGATATTAACTCAAAGATGGATGGTGTGAGTGTCGATTTCTTTGTACAAGAAAACACAATCCAACTATATGACGCAACTAGAACATACGACAAAAACTTTGCTGTTATCTATGATAACCGAATATACCTAAGCCAAGTTGATATAACCTCACCCGAGGCATTCAACCCGGTAAAATGGAAACCAGTACGTACAGACCCAAGTTGGAAGCTGGTTACGACTAATGCACCAGCGTTGACGAATCTTTCTGCTGGCGATCACATATTGGCACAGACCATAAGTAGCGACGTAACATTTACCTTACCAACTAATGCTCTTAATGGGGACGTTATTGTTATCAGAGATAATGGTTCTAATCTTCACGATTATACCATAGATGTTTCTGGTAATGGAAGAACTATTTCCGGTTTGGCTTCTTATAAGATCACAGCCAAAAATTCATCCAACTACTTCATTTTGAATGGTAGCGAATGGTTTGTTCAAACTGAATACGCTGGTGATGTAAACAAATCATTTATCAGCAACAAGTCGTACCCAGCCGGTGGATATTATAAATCCATTGTTGGTGACCAGTTGATGAGAGAAACCAGATATACTGGTGGAATTAAGATCCAACTACCAAAATACGCCAGAAACGGTGATACTATTACCACATATGATCTTGATGGTAATAACCCCGTAACAAAGACAACCGTAAACGTTCATCCGGGTAGTAGCCACAACATTATAGTTGAATACGGATCGACCCCAATGAAAACGGTCGTTTTTGATTCTACAGATTGGGGTATGTTTGTTTTTGATTCAAGTCTAAACGCTTGGAGAGTTTTCGACGCTGACAACCTTAGTCGTTGGAAAAGTGTCAAAACATCCACATACTTAGGTCAACCAAACGACCGACTAGTAGTTTATACTGAAACTCCGTCGACTGTCAACATTACATTCCCTCGTGATGCGGCAAGAGGTGATAGCTTCTTTATAGACACACGATACATGAAAAGGGGTTCCACTTTAACTTTAAATATTGATGCATCCAGTACAAATGATTTCTTTGTACCAGATGGTAACACTCTAATGAACCCCCGGATCAGCGCATACCGCGATTTTCTTGCTAATATGGAATCAAAGACCGTAAAAACTCAGTCATTTGATATCCAAAACCGTGGGGAACAGTGGGAATTTGTGTACTTCACAAATGCTCTTGGTTCTGGTAAAGACGTTTGGTCTGTTGTTACTATGTCTGAGATTCCGTATCGAGTAGACCGAAATGTACCAGAATTTTATGGTATGGCTGCCATTGCATCTCAATCATCTGTAAACAAGAACAAAGAAGAGATCACGACAGGTCAAAACCCAGATTGTGAGGATTTTGTTACCGCAGAAACATTGGCTAACAAAACAGCAAGTACCGTCCGGCGTGGTATCACCCGATATGCATCTAATAGTGAATCAAAGGCAGTTAGTGGAAACCTATCCGATGAAGCATGGTCAGGGGTGGCAATAAGCCCGTTCCTGTTGAACGACCGTCTATCTACAACAACAATGCGTGGTTTGTTGAAGGTAGCGACACAGAGTCAAGCAAACGCACAATCCGGTTCCGGTGAAAACTGGGCTCAGGTTGCGGTCACACCATCTACCCTTAACGGTAGAGTCGCCACCGAGTCTATGACTGGTTTATCTGCTCTTGTCTCAGCTAATGGAACTAAGCCTACCACAAGAACAACTCCGGGTACAGGTGTTTATGATTATAACGATCATAGCAAGGTAATCACTCCGAAAACCCTATTTGAGAAAAACGCAACTGAGTTTTCACAAGGTATGGTGTACATTGCCAACCAAGGGGAGGTTAACACAGGTACTGCCGACACCGCAACCGGTGCGCTAGTAGTAACCGCAACTACCCTAGAAGGACGTCAGGCTACAGCATCACTAACCGGGTTGTCAAGGGCTGCAACATCAATAGAAGTACTTAGTAACACACCACCGGCTGGTGACAACGTACACGTTAGCGCAAAAGGACTTGTAAGTAGAACCGCAACCGAAACCCGTTGGGGTTTGTCCGAAACCGCAACACAAGCGGAAGTAGATGCGGGAACATTACATGACAAATGGTTTGTTACTCCAAAAACATTTGGTAACTGGTTAGCTAGAGAAAGACTGACTGTGTTCGATACATCGGGACTTAGAACAGTTGGTAATATTTGGGAAGGTCAATCTTTTAATATCGTTATTCCTACTGAGTCACAACGAGGTACTGCTAGAATTGCAACTCAGAATGAAGTAAACGATATGACCGGAACCGCAAATGACGAAATTATCGTAACTCCAAAGAAACTGAGTGCAAGACTAGCGACTACAACCCAAACGGGTTTGTCTCAAATTGCAACTCAATCTGAGGTTGATACCGGTACTAACAACACAAAATACCTAACCCCGTTAACCGCTCTAACCAGCTCTAGAAATAGTGCAGGTTATAGAATGACTGATACTAGATATGGTGTTGGTATTACTGCAATATTGTCAAACAACAACTCTGCTAACTCCGTGTTTGAAGGCAATGATATTCTTGGTTCTACAAGAGCATTAACAGGCTACGCACATGGAGATGTATTGGTTTCCCCGAGAGGTTTGAATACAGCATTATCTAATTTCCTACCCCTTAAAGCTGTGGCTGTAAGTGCCAGTGCAATGGAGGTTGGTGGAAACCGTATACCTTCAACTGATTGGGTTCGTCGTACTATCGCACAAACAATAACCGGCGAAATGACGTTTACCGCAAATCCGTCTATTGAGAAGATTAGACCTTATTTCTATCTCAACGAAACATCGACTACATCTCATGTATCCATGATCCAGTGGAAACGTCAGGGTAGCAATGCGTTTTTAGATCTTGGTGTAAACACGATTGATGGTCCATTAGTCCTTAACGCAATGGACGAAAACAGTAGATACTATAGGGTCTTTACTGTTGAACGGGATGGTAATGCAATATTCACCAACCAAGTTCAAAACGGCGGACAGAACCCAACGTCTGGGAACCACCTTGTTCGTTTTGCTTATGCAGAAGAAAGATATGTTCGTGGACCGGGTAACTTCGCAGAAACTATTACCGGTAACAAGACTTTTGTTAATACTACATATTTTAAGAACAGCGGTGTCCAAAATATATGGATGGGTAATACTTCTAAGAGTGGGATAACCATAAACGCAAACGAGAGTTTGAATATTGGTTCTCTTGGTGGATTACAAATTCGCCCTAATGGTCTATCTTCGCCATCAAATACATCATCGTTTGAATCGAATGGTGACCTAAAGGTAAATGCTCAAGTTAAGATAGGAAGTGCATTACCGATTGATCCTGATGATGCAATTCGTAAAGACTATCTGGATTCCGTGATAGACGATATGAATACTACATCTGGTTCTCGTGTGTTTAAGGGTGGTGATACCATGACAGGCGAGCTTATCATCAATTCGGTGAAAGCGCTAACCGTAAATGGTGATTCTAACCTGAATGGAACAACAACCGTAAATAAACTTAGGATAGCAGTTGGTAACGGAGAATTCTTAGAAATAAGAGCAAACCCAACTACCAAGTCTGTTGACTTTGTTTGGATCAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f545df80db6e19e352a1356ac77525ac4257b39ce43e4bcb32b2d610d81dbcc3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2808
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of bacteriophages against Aeromonas spp Nagar,V., Pansare Godambe,L., Newase,S., Tyagi,A. and Shashidhar,R. 2024-10-17 — GenBank