Protein

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Genbank accession
URG17628.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,67
Protein sequence
MEVQGSLGRQIQGISQQPPAVRLDGQCSEMVNMVPDVVEGTKSRMGTTHIAKLLEYGEDDMAVHHYRRGGEGDEEYFFIMKKGQVPEIFDKQGRKCMVQSQDAPMTYLSEVTNPREDVQFMTIADVTFMLNRKKIVKARPERSPQVGSTAIVFMAYGQYGTHYKIIIDGVVAAGYKTRDGAEAHHIEDIRTESIAYNLYQSLQSWDKIADYETQLDGTSIYITRRDGSTTFDITTEDGAKGRDLVAIKYKVASTDLLPSRAPEGYKVQVWPTGSKPESRYWLQAEKQNGNIVSWKETLAADVLIGFDKSTMPYIIERTGFVNGVAQFKIRQGDWEDRKVGDDLTNPMPSFIDEEVPQTLGGMFMMQNRLCVTAGEAVIATRTSYFFDFFRYTAVSAVATDPFDVFSDASEVYQLKHAVTLDGSTVLFADKSQFILPGDKPLEKSNVLLKPVTTFEVNNNVKPVATGESVMFATSDGAYSGIREFYTDSYSDTKKAQAITSHVNKLLEGNVIMMSASTNVNRLLVLTDKYRNIIYCYDWLWQGTERVQAAWHKWEWPLGTFIRGMFYSGEHLYLLIERGSTGVYLERMDMGDALVYNLNDRIRMDRQSELVFRHIKEEDVWVSEPLPWQPTDVTLLDCVLIEGWDSYIGGSFLFSYNPGDNTLTTTFDMHDDNHVKAKVVVGQLYPQEFEPTQVVIRDNQEKVSYIEVPTVGLVHLNLDKYPDFKVEVKNLKSGKVRNVLASNRIGGARNNIVGYVEPREGVFKFPLRSLSTDTVYRVMVESPHTFQLRDIEWEGSYNPTKRRV
Physico‐chemical
properties
protein length:803 AA
molecular weight: 91119,08170 Da
isoelectric point:5,37762
aromaticity:0,10585
hydropathy:-0,37509

Domains

Domains [InterPro]
IPR058003
TTP
3–802
IPR058003
URG17628.1
1 803
Architecture
TTP
TTP 3-802 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URG17628.1
1 803
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9898
Central domain 145 359 216 0,1207
C-terminal 360 803 443 0,2633
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-359
C-terminal
360-803

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage GRNsp51
[NCBI] 		2948587 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Zindervirus
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG17628.1 [NCBI]
Genbank nucleotide accession
ON526839 [NCBI]
CDS location
range 13485 -> 15896
strand -
CDS
ATGGAAGTTCAAGGTTCTTTAGGTCGCCAGATTCAAGGCATAAGCCAGCAACCTCCAGCAGTAAGGTTAGATGGTCAGTGTTCAGAAATGGTTAACATGGTGCCTGATGTAGTAGAGGGAACCAAGTCACGCATGGGTACAACTCATATTGCCAAACTATTAGAATATGGTGAAGATGACATGGCAGTCCACCATTACCGTAGAGGTGGTGAGGGTGATGAGGAATACTTCTTCATAATGAAGAAGGGTCAAGTACCTGAAATCTTTGACAAACAAGGACGTAAGTGTATGGTGCAATCACAGGATGCACCTATGACTTATCTTAGCGAGGTGACCAACCCTAGGGAAGATGTGCAATTTATGACGATTGCAGATGTGACCTTCATGTTGAATCGCAAGAAGATCGTCAAGGCCCGACCTGAACGCTCCCCTCAAGTAGGTAGCACTGCTATTGTCTTTATGGCCTACGGTCAGTATGGTACGCACTACAAGATTATTATTGATGGTGTAGTGGCTGCTGGTTATAAGACTAGGGATGGTGCCGAGGCACACCATATTGAAGATATCAGAACTGAAAGCATAGCTTACAACCTGTACCAGTCACTCCAAAGTTGGGACAAGATTGCAGACTATGAGACTCAGTTAGATGGCACCTCAATCTATATCACAAGGAGGGACGGCTCTACTACCTTCGACATAACCACAGAAGATGGGGCAAAAGGTAGGGATTTGGTAGCTATCAAGTATAAGGTGGCATCTACAGATCTCTTACCCTCACGTGCCCCAGAAGGCTACAAGGTGCAAGTCTGGCCTACTGGTAGTAAGCCTGAATCTCGGTACTGGCTGCAAGCTGAGAAGCAGAATGGGAACATTGTCTCTTGGAAGGAGACACTGGCCGCCGATGTGTTGATAGGATTTGATAAATCAACCATGCCTTACATTATAGAACGTACAGGGTTTGTTAATGGAGTTGCGCAGTTTAAAATCAGACAAGGCGACTGGGAAGACCGCAAGGTAGGTGATGACCTGACTAACCCTATGCCATCATTTATTGACGAGGAAGTGCCTCAGACATTAGGTGGTATGTTCATGATGCAGAATCGCCTATGTGTTACTGCGGGTGAGGCTGTAATTGCAACTCGCACATCCTACTTCTTTGACTTCTTCCGGTATACTGCCGTGTCTGCTGTAGCCACTGACCCTTTTGATGTATTCTCAGATGCGAGCGAGGTCTATCAGCTTAAACACGCGGTTACATTGGATGGGTCTACTGTATTGTTTGCAGATAAGTCTCAGTTCATCCTTCCTGGCGATAAGCCTCTTGAGAAGTCAAACGTATTGCTCAAGCCTGTAACAACATTTGAAGTTAACAATAATGTCAAGCCTGTAGCTACAGGTGAGTCCGTAATGTTTGCTACAAGTGACGGTGCTTACTCAGGAATAAGGGAGTTCTACACGGACTCTTATAGTGATACCAAGAAGGCGCAAGCAATAACTAGTCATGTCAATAAGTTGCTAGAAGGTAACGTTATCATGATGTCGGCTAGTACTAATGTGAACAGACTTCTAGTCTTGACCGATAAGTACCGAAACATTATCTACTGCTATGACTGGTTGTGGCAAGGAACAGAACGTGTACAAGCTGCATGGCATAAATGGGAGTGGCCTTTGGGTACGTTTATCCGTGGCATGTTCTATTCAGGTGAGCACTTATATTTGCTCATAGAGAGAGGCAGTACTGGTGTGTATCTTGAGCGCATGGACATGGGTGATGCGCTTGTATATAACCTGAATGACCGCATCCGTATGGATAGGCAATCTGAACTTGTCTTTAGACATATCAAGGAAGAAGATGTGTGGGTGTCTGAGCCGTTACCTTGGCAACCAACCGATGTAACATTGCTTGACTGTGTACTGATAGAGGGGTGGGACTCTTACATAGGCGGGTCTTTCTTGTTTAGCTATAACCCAGGCGATAACACCTTAACTACAACCTTTGATATGCACGATGATAACCATGTGAAGGCTAAGGTAGTAGTCGGCCAGTTATACCCACAAGAGTTTGAACCTACACAGGTAGTAATACGTGATAACCAAGAGAAGGTGTCTTACATAGAGGTACCAACAGTTGGCTTGGTTCACCTTAATCTAGACAAGTACCCTGACTTCAAGGTTGAGGTCAAGAATTTGAAGAGTGGCAAAGTGCGAAATGTATTGGCCTCTAATAGAATAGGTGGTGCCAGAAATAATATTGTTGGTTATGTAGAGCCGAGAGAGGGTGTATTCAAATTCCCACTAAGGTCTCTTAGCACCGACACAGTTTATCGTGTGATGGTAGAATCACCTCACACCTTCCAGCTTAGAGATATCGAGTGGGAAGGTTCGTACAACCCTACTAAGAGGAGAGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d24d7dafda8c0100df8c2c4c5d2acd41bc4aaea097829dbb3dff897b09e2655b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3020
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A cocktail of three virulent phages controls multidrug-resistant Salmonella infection in poultry Li,Y., Lv,P., Shi,D., Zhao,H., Yuan,X., Jin,X. and Wang,X. 2022-07-06 — GenBank