Protein

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Genbank accession
QIG68737.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MTGLELIPLIVSSAATTVAAANALYLGTAALLYGGLAVGLGFVSKALTPKPSVPKPEDGTYNLKQSVPSLPIILGRVKKAGDYVFLEESNGTAYHIVVTAGHRIQGFVQHYLHDEAVSIDSTGIVYSPAHFVDDDEHFVVIDTRLGLSAETAYSSAVGEFPSIWSNNHRGDGLASIMMYCATASSKKYLTVYPNQMPEHSAVIDGMRLYDPRTETTAFSTNIALMRLWHLTSPYGGKLSLNDMYLPDWMNAADVCDELVTKRGGGTQFRYHGGMWFRANSDPIEVGRTLDQAAELVVYERSDGKIGVHAGEYVEPTKLFTRSNIISFGLNANVDPSTSVLAVRGRFTDPTDLYNTNDAAIYGNPYVGEDTERTSTVDNVAVQSHNHIQRLQKLAYIRRNAPRVSITAHYDLDNDPSYDRFVRVQYGPKLADAIVEITSKVSISLRDMTVSFSGIVVSAELYDFDAATEEGAPGSSIVVIPHAGVPVPTGFSVVIQQEVVSGGSTAAYALATWSHVSNSLTYEFEWEKTSGSTGPQSAISVAPNDQVRSGYLADGTQYKFRLRAWAGGASSDWTAYQTLTATADPTPPGAVTGASVTGGAGQGTYNWTAPNSANYAGARLYVNTSNTFTGATLMATEYGAPSSADSHVVTGLTAGTIYGFIVAINASGVAASAVATGSFVVT
Physico‐chemical
properties
protein length:681 AA
molecular weight: 72627,20040 Da
isoelectric point:5,26286
aromaticity:0,09545
hydropathy:-0,06109

Domains

Domains [InterPro]
DC_0187
STR
2–678
DC_0187
IPR003961
STR
493–584
IPR003961 IPR013783
IPR036116
STR
509–662
IPR036116
QIG68737.1
1 681
Architecture
STR
STR 2-678 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG68737.1
1 681
Domain Start End Length (AA) Confidence
N-terminal 1 235 235 0,6055
Central domain 236 441 207 0,0537
C-terminal 442 681 239 0,3773
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-235
Central
236-441
C-terminal
442-681

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM3_3_14B
[NCBI] 		2509575 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG68737.1 [NCBI]
Genbank nucleotide accession
MN988496.1 [NCBI]
CDS location
range 57237 -> 59282
strand +
CDS
ATGACTGGTCTTGAGCTGATCCCGCTGATCGTATCGTCAGCGGCAACGACGGTTGCTGCGGCAAACGCGCTTTATCTCGGCACGGCGGCGCTGCTTTATGGTGGCCTCGCTGTCGGATTGGGGTTTGTGTCAAAGGCGCTGACGCCGAAGCCTTCCGTGCCGAAGCCAGAGGACGGCACATACAACCTCAAGCAGTCAGTCCCGTCGCTTCCAATCATTCTCGGACGCGTGAAGAAGGCTGGCGACTATGTCTTCCTAGAGGAGTCAAACGGCACCGCATACCACATCGTTGTCACGGCCGGCCACCGCATTCAAGGCTTCGTTCAGCACTACCTGCATGACGAGGCGGTCAGCATCGATAGCACCGGCATTGTGTACTCGCCGGCGCACTTCGTTGATGATGACGAGCATTTCGTTGTTATCGACACAAGGTTAGGCCTCTCAGCAGAGACTGCGTACTCTAGTGCCGTTGGTGAATTTCCGTCGATTTGGTCTAACAATCATCGTGGCGACGGCCTCGCCTCGATCATGATGTATTGTGCCACAGCATCCAGCAAAAAATATCTGACTGTCTATCCTAATCAGATGCCGGAACACTCGGCGGTCATTGACGGGATGCGGCTGTACGATCCTCGCACCGAAACCACGGCGTTTTCCACCAACATTGCCCTGATGCGGCTGTGGCACCTTACCAGCCCATACGGCGGCAAGCTGTCACTCAACGACATGTATCTGCCCGACTGGATGAACGCGGCTGATGTCTGCGATGAACTGGTCACGAAGAGGGGCGGCGGCACTCAGTTCCGTTATCACGGAGGCATGTGGTTCCGGGCGAACAGCGATCCGATCGAGGTTGGGCGCACGCTCGACCAGGCCGCAGAGTTGGTCGTCTATGAGCGCTCCGACGGGAAGATCGGGGTTCACGCCGGCGAGTATGTCGAGCCGACCAAGCTGTTTACCCGCAGCAACATCATTTCGTTTGGCCTCAACGCCAACGTCGATCCGTCGACGAGCGTGCTGGCCGTCCGCGGGCGCTTTACCGATCCGACGGACCTTTACAATACGAATGACGCCGCGATCTACGGCAATCCATACGTTGGTGAGGATACCGAGCGCACCTCGACAGTCGATAACGTGGCGGTGCAGTCGCATAACCATATCCAGCGACTGCAGAAGCTTGCCTACATCCGGCGTAACGCGCCGCGCGTCTCAATCACGGCCCATTACGACCTGGACAACGACCCATCCTACGACCGGTTCGTGCGCGTGCAGTACGGGCCGAAGCTCGCGGATGCGATCGTCGAGATCACATCGAAAGTGTCGATCTCGCTGCGCGATATGACGGTGAGCTTCAGTGGAATTGTTGTGTCGGCGGAGCTTTATGATTTCGATGCAGCGACAGAGGAGGGCGCTCCAGGTTCGTCGATCGTGGTTATCCCGCACGCCGGCGTGCCGGTGCCAACCGGGTTTAGCGTTGTCATCCAGCAGGAAGTCGTCTCTGGCGGTTCGACCGCCGCTTACGCCTTGGCCACTTGGAGCCATGTGTCGAACTCGCTGACATATGAATTCGAGTGGGAAAAGACGTCAGGGTCCACCGGACCGCAATCCGCAATCTCGGTGGCGCCAAACGATCAGGTTAGGTCTGGCTACCTCGCCGATGGCACGCAATACAAATTCAGGCTCCGCGCGTGGGCGGGCGGCGCAAGTTCGGACTGGACAGCCTACCAAACACTGACCGCAACAGCCGATCCGACGCCGCCAGGCGCTGTCACCGGCGCCTCGGTCACCGGCGGCGCAGGGCAAGGCACCTACAACTGGACGGCGCCCAACAGCGCCAACTACGCCGGCGCGCGGCTTTACGTCAACACGTCGAACACGTTCACCGGCGCAACGCTTATGGCGACGGAATATGGGGCGCCGAGCTCCGCCGACAGCCACGTTGTGACCGGCCTGACAGCCGGCACGATATACGGCTTCATCGTTGCCATCAATGCGTCTGGCGTGGCCGCCTCGGCCGTCGCCACCGGCTCGTTTGTTGTGACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
59277530eafb3a84fdf53e9f6f8ed8388adc3c7002021529acbdce1e76ccd016
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8603
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank