Protein

View in Explore
Genbank accession
XHH73516.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MNYPNLPNSALEITEQPEVKEITNELLKQLQNALKSNTLFTEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEWLSNAVESLKLKMKEYEGFFSDFNTSMKANEQEVTATLNANTENIKSEIKKLENQLIESATTQINTDKQEVLNNITQEKNQATNEINEAKKTAFNELLETLKPKFSGLFTGVYYIRNVIYINGGWEAKIKDLSDYELEKSKKYEIEVFFQFVSAKIVEKYPYFVLKVQEGFLKESIHKITHKYVSQIYHSKLLINNVSGVLSLYHGYFYGNINYFNEAIITSIKELPNDKIMKKVFNGSNFNNATTIVPNLNDTNETTNTRS
Physico‐chemical
properties
protein length:341 AA
molecular weight: 39216,97100 Da
isoelectric point:5,52392
aromaticity:0,10264
hydropathy:-0,43783

Domains

Domains [InterPro]
DC_0415
STR
2–340
DC_0415
Coil
Unmapped
114–134
Coil Coil
XHH73516.1
1 341
Architecture
STR
STR 2-340 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage Pt11423_1
[NCBI] 		3331672 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHH73516.1 [NCBI]
Genbank nucleotide accession
PQ159897.1 [NCBI]
CDS location
range 12521 -> 13546
strand -
CDS
ATGAATTATCCTAATCTACCTAATAGCGCGCTAGAAATCACCGAACAGCCCGAAGTGAAAGAAATCACTAACGAGCTTTTAAAGCAATTACAAAACGCTTTAAAAAGTAACACGCTTTTTACCGAGCAAGTGGAATTAAGCCTTAAAGGCATTGTTAGGATTTTAGAAGTGCTTTTGAGTTTGGATTTTTTTAAGAATGCGAATGAAATTGATAGCAGTTTAAGAAATTCCATTGAATGGCTATCTAACGCCGTCGAGAGCTTAAAATTAAAAATGAAAGAATACGAGGGCTTTTTTAGCGATTTCAATACGAGCATGAAGGCTAACGAGCAAGAAGTAACCGCTACCTTAAACGCTAACACCGAGAACATCAAAAGCGAAATTAAAAAGCTAGAAAACCAATTGATAGAAAGCGCTACAACACAAATTAACACCGATAAGCAAGAAGTTTTAAACAATATCACGCAAGAAAAAAACCAAGCCACAAACGAGATTAACGAAGCGAAAAAAACCGCGTTTAACGAACTTTTAGAAACCTTGAAGCCGAAGTTTAGCGGCTTGTTTACTGGCGTGTATTATATTCGCAATGTGATCTATATCAACGGCGGATGGGAAGCAAAGATCAAGGATTTAAGCGATTATGAGCTAGAAAAAAGCAAAAAATACGAAATAGAAGTGTTTTTCCAATTTGTGAGCGCGAAAATTGTAGAAAAATATCCGTATTTTGTACTGAAAGTGCAAGAAGGCTTTTTGAAAGAAAGCATTCATAAAATCACACATAAGTATGTCTCTCAAATTTACCACTCAAAGCTTTTAATAAATAATGTGAGCGGTGTTTTAAGCTTGTATCATGGCTATTTTTATGGCAATATCAATTATTTCAATGAAGCGATTATAACAAGCATTAAAGAATTACCCAACGATAAAATTATGAAAAAGGTGTTTAATGGATCTAATTTTAACAACGCCACAACGATCGTGCCAAATTTGAACGACACCAACGAGACAACAAACACAAGGAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
199957604d85e7b2894f4001988492f55ccb8ea385c4ffd93da98f01b45b5ee8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6098
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening and in silico characterization of prophages in Helicobacter pylori clinical strains Ferreira,R., Pinto,G., Presa,E., Oleastro,M., Silva,C., Vieira,L., Sousa,C., Pires,D.P., Figueiredo,C. and Melo,L.D.R. — — GenBank