Protein

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Genbank accession
AYJ73297.1 [GenBank]
Protein name
major tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MHLPNGSQIFIGSEMGAEINATQVSKAEKPVLSVASTDGVAAGNYVIITSATWGRMVDRVLRVDSIVEDTSVTLEGIDTTDPNVFPAGTNTATFRVITSWTEIPCVQDLAQDGGEQQFYTYQCLSDDQEQQLPTFKSAVSLTYTFAHEYNNPIYPMLRKADESGDVTPMRMFVPKAKEMRLWAGVLSFNEIPQTSVNEMETVSLSVSLKGKFTFLPSE
Physico‐chemical
properties
protein length:218 AA
molecular weight: 23992,76470 Da
isoelectric point:4,55430
aromaticity:0,08716
hydropathy:-0,16743

Domains

Domains [InterPro]
DC_0037
ATT
1–50
DC_0037 IPR014918
AYJ73297.1
1 218
Architecture
ATT
TAS
ATT 1-50 | TAS 52-215 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYJ73297.1
1 218
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,9544
Central domain 13 207 196 0,0355
C-terminal 208 218 10 0,5481
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-207
C-terminal
208-218

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage CS01
[NCBI] 		2496544 Uroviricota > Caudoviricetes > Drexlerviridae > Kyungwonvirus CS01 >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYJ73297.1 [NCBI]
Genbank nucleotide accession
MH845412 [NCBI]
CDS location
range 9564 -> 10220
strand -
CDS
ATGCACCTTCCTAACGGTTCTCAAATTTTCATCGGTAGCGAGATGGGCGCGGAAATTAACGCGACTCAAGTTTCCAAAGCCGAAAAGCCGGTTCTTTCTGTGGCGTCTACTGATGGCGTAGCGGCGGGCAACTACGTTATTATTACCAGCGCCACCTGGGGCCGCATGGTTGATCGTGTTCTTCGCGTGGATTCCATCGTCGAAGATACCAGCGTTACCCTCGAAGGCATCGACACCACTGATCCGAACGTTTTCCCGGCAGGCACCAACACCGCCACCTTCCGCGTCATCACTTCGTGGACTGAGATCCCATGCGTTCAGGATCTGGCGCAGGACGGCGGCGAGCAGCAGTTCTATACCTACCAGTGTCTTTCTGACGATCAGGAACAGCAGCTTCCGACCTTCAAGAGCGCAGTGTCGCTGACTTACACGTTCGCGCATGAGTATAACAACCCGATCTATCCGATGCTGCGCAAGGCTGACGAAAGCGGCGACGTTACACCAATGCGCATGTTCGTGCCGAAGGCTAAAGAAATGCGCCTGTGGGCCGGGGTTCTTTCTTTCAACGAAATCCCGCAAACCAGCGTCAACGAAATGGAAACTGTATCACTTTCCGTTTCCCTGAAAGGTAAATTTACCTTCCTACCTTCCGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
64efbcc6f972f38db917d312553a2999063412d5666def576af4d4140b3223f9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9423
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Analysis and Characterisation of Bacteriophage CS01 Active against Cronobacter sakazakii Kim,G.-H., Kim,J. and Yoon,S.-S. 2019-05-28 — GenBank