Protein

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Genbank accession
XLZ16335.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,55
Protein sequence
MADLKRKFRAQEGLDAAGEKVINVQTADRTIPSDGVNVEFLVQENTLQHYDETRWYPKNFAVIYDNRIWVANREIAKPSGAFNELYWTALRTDAKWKTESSGTINLKSGDFISADTSGRGTIKFVMPSAPQDGDTIFIKDIGGQPGYADVTIDASIQSIVWLGSQVRSVRMTHPYSQMVLVFSNRLWQLYVSDNERTATTITPASIHEAQANEFIVRRYTTGAPIRVTLPKFANDGDIINFTDMDGMNPLFHMYVSTYNANTSIGSVGTTSLEVRSSGDGFIVFDAVEKLWRVWDGDLRTRLRIIKEDTEVRPNDHVMVFGTNNSTVKKVVITLPPAPGIGDTVKISLNYMRKGQTVDITCTGIDTIAASVSLLQFPKRSEYPPDTTWVQNKTLSFNGDTSYVPVLDLSYIEDGGLKYWVVSDNTPTVERVDSKTDATRSRLGVIALATEAQAMVDHENNPEKELAITPETLAKRVATKLRRGIARLVTLAEIQAPTAGPHLDDVIVTPAMLNEKTATETRRGIAEIATQSETDGSTDDTTIVTPKKLHNRKASEILTGILALVKTGITTVAGIDRDTKGTNVYDNTENTKAVTPASLFENKATYTSQGGTYLATENEVINGTVHDPKVPTAVTPVELHKKTATEGRIGFTEIATQPETDAGTDDFRYITPKKLSGRKATQDLTGLARIATQPEFNAGALDDVISTPLKIKTYFSDPARHSVEPLSGLVESGNSWDHYKLDIKKASETQRGTLAVATKILVDAGVDDQTIITPKKLQDKKTSETTEGIIQIATQLETTTGTVGNKAVPPVHLKYAIQEQADWEATPTRRGPVKLTELALTFVGDKVFGSGVKFNAITGLYENDDAKLTAGNYFKIGYAVSPFEMNKTLQNFLPINAIATDSHKLDGLDSLQFIRRDIDQTVNGSLTLTKQLNTSAPMVSSSTSKFTNVMATIDLTVGDDSSHSVINLNAKGNHWLIDAQSQSTYLDFTADADVLRLKRDGDVEVGQTLKAGNRIDAMKGFSVEGGTMVINPTPSNIQFGSQSKATNIQTTDASNLTVTDSTGTSTVITTKNMVNQIGLNFVKKIGDSMTGNLLIDATLRVQIPEGVVTPDQAPTDANPNAWSSSIKTSAVYNKLPGFVVPVYGTNEEGNPVAIDYTEVKGPGTLTQHGIDKNSIWQIWAPRPATVDATYFAQTFWVRNFNALTGKWDKWGRMYTSNNPPTSKEIGAVAAGGSAFDNLTIRDWLQIGNVRITPNPVTQSIDFTWIP
Physico‐chemical
properties
protein length:1265 AA
molecular weight: 138152,67810 Da
isoelectric point:5,56087
aromaticity:0,07273
hydropathy:-0,32443

Domains

Domains [InterPro]
DC_1986
ATT
10–135
DC_1986 DC_1209
IPR048391
ATT
1113–1213
IPR048391
XLZ16335.1
1 1265
Architecture
ATT
STR
ATT
STR
ATT 10-135 | STR 342-1112 | ATT 1113-1213 | STR 1214-1248 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLZ16335.1
1 1265
Domain Start End Length (AA) Confidence
N-terminal 1 981 981 0,8834
Central domain 982 1180 200 0,2113
C-terminal 1181 1265 84 0,1629
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-981
Central
982-1180
C-terminal
1181-1265

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage Ursula
[NCBI] 		3384777 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter braakii
[NCBI] 		57706 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLZ16335.1 [NCBI]
Genbank nucleotide accession
PQ589834 [NCBI]
CDS location
range 165246 -> 169043
strand +
CDS
ATGGCCGATTTAAAAAGAAAATTCAGAGCTCAAGAAGGTCTGGATGCGGCGGGTGAGAAAGTAATTAACGTACAAACCGCCGATCGTACTATTCCGAGCGATGGTGTTAACGTTGAATTTCTCGTTCAAGAAAACACATTACAACACTACGACGAAACCAGATGGTATCCAAAAAATTTCGCAGTGATTTATGATAACCGCATTTGGGTTGCAAATCGCGAAATCGCGAAGCCTTCTGGCGCATTTAACGAGCTTTACTGGACTGCGTTACGTACTGACGCAAAATGGAAAACTGAATCCAGCGGAACAATTAATCTGAAGTCTGGGGATTTCATTTCTGCTGATACTTCAGGTCGTGGCACAATTAAATTTGTTATGCCAAGCGCTCCACAAGATGGAGACACAATATTCATCAAAGATATCGGTGGACAACCTGGTTATGCTGATGTAACAATTGATGCTTCTATTCAATCTATCGTTTGGCTTGGGTCTCAAGTTCGTAGTGTACGAATGACTCATCCATATAGTCAAATGGTTTTAGTTTTCAGCAATCGTTTGTGGCAACTTTATGTCAGCGACAATGAGCGCACGGCCACAACAATTACCCCGGCGAGTATTCATGAAGCACAAGCTAATGAATTCATCGTTCGTCGTTATACGACTGGGGCTCCTATTCGTGTAACTCTTCCTAAGTTTGCGAATGATGGAGATATTATTAATTTTACAGACATGGATGGAATGAACCCTTTATTCCATATGTATGTGAGTACATACAACGCTAATACTTCTATTGGATCAGTAGGAACAACTTCGTTGGAAGTTCGTTCTTCTGGCGATGGATTTATTGTATTTGACGCAGTGGAAAAACTGTGGAGAGTCTGGGACGGTGATCTTCGTACTCGTCTTCGCATTATAAAGGAAGATACTGAAGTACGTCCGAATGATCACGTGATGGTGTTTGGTACAAATAATAGCACTGTCAAGAAAGTTGTAATTACTCTGCCTCCGGCTCCAGGTATCGGTGATACCGTTAAGATTTCTTTGAACTACATGCGCAAAGGTCAAACAGTAGATATCACGTGTACTGGAATAGATACTATTGCTGCTTCCGTTTCATTGCTTCAGTTTCCTAAACGTTCAGAATATCCACCTGATACTACATGGGTGCAGAACAAGACTCTAAGCTTCAATGGTGATACTTCTTATGTTCCGGTATTAGATCTGTCTTATATAGAAGATGGCGGATTGAAGTATTGGGTTGTTTCTGATAACACGCCGACAGTAGAACGTGTTGATTCAAAGACTGACGCTACGCGATCTCGTCTGGGTGTTATCGCTTTGGCTACCGAAGCTCAGGCAATGGTTGATCATGAAAATAATCCAGAGAAAGAATTAGCAATTACCCCAGAGACACTTGCTAAACGTGTTGCTACTAAGCTTCGTCGTGGGATTGCTCGTCTAGTTACTTTAGCTGAAATTCAAGCTCCAACCGCTGGTCCGCATCTTGATGATGTAATTGTTACTCCAGCAATGCTGAATGAGAAAACAGCTACTGAAACTCGCCGTGGTATAGCTGAAATTGCTACTCAGTCAGAAACTGATGGATCAACTGACGATACGACTATTGTGACTCCTAAGAAGTTGCATAATCGTAAAGCTTCAGAAATATTGACTGGTATTTTAGCTCTGGTTAAAACTGGAATAACTACTGTTGCTGGTATAGATCGTGATACTAAAGGAACTAACGTATATGACAACACTGAAAATACAAAAGCTGTAACTCCAGCTTCTTTGTTTGAAAATAAAGCAACTTACACTTCACAGGGTGGTACTTATTTAGCAACTGAGAATGAAGTAATTAATGGAACAGTGCATGATCCTAAAGTTCCTACTGCCGTAACACCGGTTGAGTTACATAAGAAAACTGCAACAGAAGGAAGAATTGGTTTTACTGAAATTGCTACTCAGCCAGAAACTGATGCTGGTACTGACGATTTCCGATACATTACGCCTAAGAAATTATCTGGTCGTAAAGCAACCCAAGATTTAACTGGATTAGCACGTATCGCTACTCAACCAGAATTCAATGCTGGCGCATTGGACGATGTCATCTCGACTCCATTAAAAATTAAAACTTATTTCTCTGATCCTGCTAGACACTCTGTTGAACCATTGTCTGGATTAGTTGAATCAGGTAACTCCTGGGACCATTATAAACTCGATATTAAGAAAGCATCTGAGACACAGCGTGGTACTTTGGCGGTTGCTACTAAGATTCTGGTAGATGCTGGTGTAGATGACCAAACTATCATTACTCCTAAAAAGCTTCAAGATAAGAAGACATCAGAAACTACTGAAGGTATTATTCAGATCGCTACTCAACTGGAAACAACGACTGGTACAGTCGGTAATAAAGCAGTTCCTCCGGTTCATCTGAAATATGCTATTCAAGAACAAGCTGATTGGGAAGCTACTCCGACTCGTCGAGGTCCAGTTAAATTAACTGAATTAGCACTTACTTTCGTCGGCGATAAAGTATTCGGTTCTGGTGTGAAGTTTAACGCTATTACTGGACTTTATGAGAATGATGATGCTAAACTAACCGCAGGAAATTATTTCAAAATTGGATATGCTGTATCTCCATTTGAAATGAATAAAACGCTTCAGAACTTCTTACCGATCAACGCAATTGCTACAGATTCACATAAGCTTGACGGATTGGATTCACTTCAGTTTATTCGCCGTGATATCGATCAGACTGTTAATGGTTCATTAACTTTGACCAAGCAGTTAAACACTAGTGCACCTATGGTGTCCTCTAGTACATCGAAGTTCACCAACGTAATGGCTACTATAGACCTGACCGTTGGCGATGACTCAAGTCACTCTGTGATTAATTTGAATGCCAAAGGGAACCATTGGTTGATCGATGCTCAGTCTCAATCAACTTATTTGGATTTCACTGCGGATGCTGATGTACTCCGTCTGAAACGTGATGGTGATGTTGAAGTTGGACAAACGCTTAAAGCTGGCAATCGAATTGATGCTATGAAAGGCTTTAGCGTAGAAGGTGGTACAATGGTTATTAATCCTACCCCTTCAAATATTCAATTTGGTTCACAATCAAAAGCTACTAATATTCAGACAACTGATGCTAGTAACTTAACAGTAACTGATTCCACTGGTACTTCTACAGTGATCACTACTAAGAACATGGTAAATCAAATTGGTTTAAACTTCGTCAAGAAAATTGGCGATTCAATGACTGGAAACCTCTTGATTGATGCTACGCTTCGCGTACAGATTCCTGAAGGTGTAGTTACTCCAGATCAAGCCCCGACTGATGCTAACCCAAACGCATGGTCTTCTTCAATTAAAACTTCTGCTGTGTACAATAAGCTTCCGGGCTTTGTTGTTCCGGTATATGGAACTAATGAAGAAGGTAATCCAGTTGCAATTGATTACACTGAAGTCAAAGGTCCAGGCACATTAACTCAACACGGTATTGACAAAAATAGCATTTGGCAAATTTGGGCTCCACGCCCAGCTACGGTTGATGCTACTTATTTTGCTCAAACATTCTGGGTGCGTAACTTCAACGCCCTGACTGGTAAATGGGATAAATGGGGTAGAATGTATACCAGCAATAACCCTCCTACTTCTAAGGAAATTGGTGCGGTTGCGGCAGGTGGTTCTGCATTTGATAACTTAACAATCCGAGATTGGTTACAGATCGGTAATGTTCGTATAACTCCGAACCCGGTAACTCAATCTATAGATTTCACTTGGATTCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3dadc9241bf259e402480b2e6bd33f3bb43405843f66a4b027d1167dfb9f84ee
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2704
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and complete genome sequence of Citrobacter bacteriophage Ursula Efimov,A., Golomidova,A., Kulikov,E., Letarov,A. and Belalov,I. 2025 — GenBank