Protein

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Genbank accession
QEG06901.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSLRPIVSKGYSQTRGSNIWRTEVQGGVPRQGRDTYFEPVPISVTLVVSSLGRQAFYSFLNNIDGGASSFIMPHDTGLGLEDHQVLITSDISDSTDDGKNWVITFTATAERTAIQEDTCLTKNLPDLFGCYGDCLGGFLKAYGAAQSTFPRIWSNEGPAGYPPINLLASTLDSRIVYDGPQVYYINRNGNLVQSAVNEWPITFIDGVAVGRVPPEVGGLNLLKMSEDLSDPVWAKTRTTVTYGGTQDPTGGTGASKLVPTTTTGIHHVSQLITPEASTAYTYSVFVKANGYNNAIVQIGVFASQVASNPVYVDLSTGVITSANDYSRCGIIAVGDGWFRVWVRVITNSSPTSINASVWASDAANNTSFPGDGVSAISVFGAQMEKSNNSSSYVKTEENLITRPAASAKVTMNGAASIDITYSDGTVVNVPSVDGYATIPQADSAWGSKYITRIDFNVDG
Physico‐chemical
properties
protein length:459 AA
molecular weight: 48940,89720 Da
isoelectric point:4,80263
aromaticity:0,09368
hydropathy:-0,09760

Domains

Domains [InterPro]
DC_0353
STR
42–459
DC_0353
NF048003
Unmapped
220–404
NF048003
QEG06901.1
1 459
Architecture
STR
STR 42-459
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Sciku
[NCBI] 		2580402 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEG06901.1 [NCBI]
Genbank nucleotide accession
MK931439.1 [NCBI]
CDS location
range 17529 -> 18908
strand +
CDS
ATGTCCCTTCGACCAATAGTGTCGAAGGGGTACTCCCAAACGCGAGGGAGTAATATCTGGCGTACAGAAGTGCAAGGTGGCGTACCGCGACAGGGGCGTGATACATACTTTGAGCCAGTGCCGATTAGCGTTACGCTCGTCGTATCGTCGCTCGGGCGACAGGCGTTCTATAGCTTCCTGAACAACATAGACGGCGGTGCGTCTTCATTTATCATGCCGCACGATACGGGTTTAGGTCTCGAAGACCACCAGGTACTTATTACGTCGGACATTAGCGACAGCACCGACGATGGTAAAAACTGGGTAATTACTTTCACAGCAACCGCGGAGCGGACTGCGATTCAGGAAGATACCTGCCTTACGAAGAATCTACCGGATTTGTTCGGTTGTTATGGGGATTGCTTAGGTGGATTCCTTAAAGCATACGGAGCCGCGCAATCAACGTTTCCACGAATTTGGAGCAATGAAGGGCCTGCCGGATACCCGCCGATTAACCTTCTGGCGTCCACGCTGGATAGCCGTATTGTGTACGACGGACCGCAGGTTTACTACATCAACCGAAACGGCAATCTTGTGCAGTCCGCCGTCAATGAATGGCCTATTACGTTTATTGATGGGGTCGCTGTTGGGCGTGTGCCGCCGGAGGTTGGTGGTCTAAACCTACTAAAAATGTCAGAGGACTTATCGGATCCCGTATGGGCAAAAACAAGGACTACTGTTACATACGGCGGAACGCAAGACCCTACCGGCGGAACGGGCGCATCCAAACTAGTCCCAACAACAACCACTGGTATTCACCACGTTTCACAATTGATAACCCCGGAAGCATCTACGGCATACACCTATTCTGTTTTTGTGAAAGCAAATGGGTACAATAATGCTATTGTTCAGATCGGAGTATTTGCTAGTCAGGTGGCAAGTAATCCTGTTTATGTAGACCTATCTACGGGGGTGATAACATCAGCTAATGACTATTCAAGATGCGGGATAATAGCAGTAGGTGATGGCTGGTTTAGAGTATGGGTGCGAGTTATTACTAATTCCTCCCCGACAAGTATAAACGCGTCTGTGTGGGCCTCTGACGCTGCTAACAACACGTCTTTCCCAGGTGATGGTGTTAGTGCTATATCAGTTTTTGGCGCCCAAATGGAGAAATCTAATAATTCATCGTCGTATGTTAAAACCGAAGAAAATTTAATTACACGCCCCGCGGCATCGGCAAAAGTAACCATGAATGGTGCGGCAAGCATTGACATTACCTATTCCGACGGCACTGTGGTAAACGTTCCGTCTGTTGACGGTTACGCCACCATCCCCCAAGCGGATTCTGCGTGGGGTAGCAAATATATCACCCGTATTGATTTTAATGTGGACGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ad1e0d0aee41719b273eca3c37092b232d01e49e78d03638524d86bc415d05a0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8887
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Escherichia coli Siphophage Sciku Hernandez,I., Castillo,M., Moreland,R., Liu,M. and Ramsey,J. 2019 31537682 GenBank