Protein

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Genbank accession
XPD06399.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAQSLEGTIQSLLQGVSQQVPRERQPGQLGAQLNMLSDPVSGIRRRPPGEIVWESTIDNPGLDSLFTEYVERGTDGRHLLINTSNGNWWLLAKNGKTILNSGNDSYFVTTVGQTSLQTASIAGLTYILNTEMAPSTAVDNTGRIDPNTTGFFYVKSAAFQKRWNVTVTSAGVDYSGDYTAPAAGSTSGNAEEVSGAYVAQQLRDSLVANGLPAGNVSVRGAYLFFYGLSNCVVSTDAGDTYAGVSNQSRVDQEQDLPAQLPAQADGAMCRVGTASSETAWYQFSYSTRTWSEVGAYGSITKITNMPRELAADDNIIARDWEGRLAGNDDNNQNPGFVENGYITGIAAFQGRLVLLSGSSVDMSASGLYQRFYRSTVTSLLDTDRISISSASAQDSVYRTAVQFNRDLVLFANSMQAVVPGSVVLTPTNASISITSTYECDSRVTPVMAGQTVIYPNKRNDSYAGILELIPSPYTSSQYTTQDSTVHLPRYIPGRVLQMQNSSVTNMAFSRMSGERSSLLVYEFMWGGSDGAKMQAAWHKWSFPYPILSVQALEDEVFLYMQGPSPSNKLLIVSMDPREGYQLGSEYREAYSDLQKQVQVQGGVFTVPAVLRPVGWADRYKEELILTYLPSNPMGPTEVGIKEIAGENTLRVVRGVPDGTYVIGRRYRSTFTLTTPILRDQNDKLVGSGHVRLLRLDVAVRNSGHFDVQVLDTPRDVNWGGELTGILMNSKELTLGQVLRMDLATITVPCRTNADTTEVSLFTEGSMELNVLDISYILRYNQRRRRI
Physico‐chemical
properties
protein length:786 AA
molecular weight: 86072,42420 Da
isoelectric point:5,15981
aromaticity:0,08651
hydropathy:-0,25407

Domains

Domains [InterPro]
IPR058003
TTP
4–786
IPR058003
XPD06399.1
1 786
Architecture
TTP
TTP 4-786
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPD06399.1
1 786
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9940
Central domain 145 343 200 0,1442
C-terminal 344 786 442 0,1000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-343
C-terminal
344-786

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_W17
[NCBI] 		3239059 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPD06399.1 [NCBI]
Genbank nucleotide accession
PP728208 [NCBI]
CDS location
range 27255 -> 29615
strand +
CDS
ATGGCCCAGTCCCTAGAGGGTACCATTCAGAGCCTGCTGCAGGGCGTCTCACAGCAGGTTCCAAGAGAGCGCCAGCCCGGGCAACTGGGGGCGCAGCTTAATATGCTCAGCGACCCGGTTTCCGGTATCCGCCGCAGACCCCCGGGTGAGATTGTCTGGGAGAGCACAATTGATAATCCAGGGCTTGATTCACTGTTCACTGAATACGTCGAGCGTGGAACTGACGGCAGGCATCTACTGATTAATACCAGCAACGGTAACTGGTGGCTACTGGCTAAGAATGGAAAGACCATCCTTAACTCCGGCAACGACTCATACTTTGTTACCACCGTAGGCCAGACCTCTTTGCAGACCGCGAGTATTGCTGGGCTGACTTATATCCTGAATACGGAGATGGCTCCAAGCACTGCAGTAGACAATACTGGGCGTATTGACCCCAACACCACTGGGTTCTTCTACGTTAAGTCTGCAGCATTCCAGAAACGTTGGAACGTCACGGTTACCTCTGCAGGAGTAGATTATTCCGGGGACTATACCGCCCCAGCTGCTGGTAGCACTAGTGGCAACGCTGAGGAGGTATCCGGTGCTTATGTTGCTCAGCAACTGCGGGACTCTCTTGTAGCTAATGGGCTACCGGCCGGGAACGTGAGTGTACGTGGTGCGTACCTGTTCTTCTATGGCCTTAGTAACTGCGTGGTGTCCACTGACGCTGGCGATACTTACGCTGGGGTATCAAACCAGTCTCGTGTAGACCAGGAGCAGGACCTGCCTGCACAGCTTCCGGCGCAAGCTGACGGGGCAATGTGCCGTGTAGGTACAGCCTCGTCTGAGACAGCGTGGTACCAGTTCAGCTACAGCACCCGCACCTGGTCTGAGGTGGGGGCGTACGGTAGCATCACCAAGATTACGAACATGCCCAGAGAGCTCGCCGCGGATGACAACATTATTGCCCGTGACTGGGAGGGGCGTCTTGCCGGGAATGACGACAACAACCAGAACCCCGGATTCGTGGAGAACGGCTACATCACTGGTATTGCAGCTTTCCAGGGCCGCCTGGTGCTACTCAGCGGCAGCTCCGTGGATATGTCAGCCTCGGGCCTGTATCAGCGCTTCTATCGCTCTACTGTGACGTCTCTGCTGGATACGGACCGTATCAGCATTAGCTCTGCGTCCGCGCAGGATTCTGTGTACCGTACCGCTGTACAGTTCAACCGGGACCTGGTACTGTTTGCTAACAGCATGCAGGCCGTTGTACCTGGCTCTGTGGTGCTTACACCCACCAACGCAAGCATTAGCATTACCAGCACCTACGAGTGTGACAGCCGCGTGACCCCGGTCATGGCGGGGCAGACAGTAATTTACCCGAACAAGCGCAACGACAGCTACGCAGGTATTCTGGAGTTAATCCCATCGCCGTATACTTCGTCGCAGTACACTACACAGGATTCTACTGTGCACTTACCGCGGTATATCCCAGGCAGGGTATTGCAGATGCAAAACTCCAGTGTCACCAATATGGCCTTCTCGCGCATGTCTGGAGAGCGTAGTAGCTTGCTGGTCTACGAGTTCATGTGGGGCGGAAGTGACGGCGCTAAGATGCAGGCGGCGTGGCATAAGTGGTCGTTCCCGTATCCAATACTGAGCGTGCAGGCGCTGGAAGATGAGGTGTTCTTGTACATGCAAGGGCCCAGCCCCAGCAACAAGCTTTTGATTGTGTCTATGGATCCGCGTGAAGGTTATCAGCTGGGTTCGGAGTATCGAGAAGCATACTCGGATTTGCAGAAGCAAGTTCAAGTGCAGGGCGGGGTCTTCACAGTACCGGCGGTATTGCGCCCAGTTGGGTGGGCTGACCGTTACAAGGAAGAGCTTATCTTAACGTACCTGCCCAGCAATCCTATGGGGCCTACTGAGGTTGGCATCAAGGAGATTGCCGGGGAGAACACCCTACGGGTTGTGCGCGGCGTACCTGATGGCACCTACGTAATCGGACGACGTTACCGTAGCACGTTTACACTGACTACACCTATTCTGCGAGACCAGAATGACAAGCTCGTGGGTAGTGGGCACGTGCGCCTGTTGCGACTGGATGTAGCGGTACGTAACTCTGGGCACTTCGATGTGCAGGTACTAGACACCCCACGGGACGTCAACTGGGGCGGGGAACTGACAGGTATCCTGATGAACTCAAAAGAGCTGACGCTCGGGCAGGTCCTGCGTATGGACCTGGCTACGATTACTGTGCCGTGCCGTACTAACGCAGACACAACCGAGGTGTCACTATTTACTGAGGGTTCTATGGAACTGAACGTGCTGGATATATCGTATATCCTGCGCTATAACCAACGCAGACGGAGAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5d1e221ac9b38e3daa1ea0b2e4934e511cdc54717596bbff3eee2bf3bc492f7b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3074
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50