Protein

View in Explore
Genbank accession
URG13114.1 [GenBank]
Protein name
putative structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MSEVKVNKISPRSGTTVTLGDSGDTFTIPSGATITNSGTAAGFGSTGEISWDTTKKTSTFTAVSGVGYFCDTSGGAITVNLPAGTAGNSFAVADYTNTFQTNNLTISPNGSQKIGGTAEDAVLSTEGQSAYFVYVDDTEGWKNVIDSTSNIVGAPPYIVATGGTITTSGNCKIHTFTGPGTFTVCTAAANAADNIVSHVVVAGGGGGAQSRGGGGGAGGFREVVSPSSPYTGSPLNGYPNSPNRVTVTATAFPITVGGGGAGGTDAGPSSDGIGTSGSNSVFSTITSAGGGGGAPGDANNPPYGPVPVQRTGLAGGSGGGGGSGNDGGGCGGAGNTPPVSPAQGFVGGNACGSSVKSAGGGGATAAGAFGPPGGCGGAGATSSINATPTARAGGGGGGQGGGPSSGRAGGAGGGGPGGGTGNGDAGTVNTGGGGGGGGNPSGRDGGAGGSGIVIIRYRFQ
Physico‐chemical
properties
protein length:460 AA
molecular weight: 42497,13730 Da
isoelectric point:5,13571
aromaticity:0,05652
hydropathy:-0,15565

Domains

Domains [InterPro]
DC_1064
ATT
4–152
DC_1064 IPR049304
IPR036240
STR
51–182
IPR036240
URG13114.1
1 460
Architecture
ATT
STR
ATT 4-152 | STR 153-458 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage phage 023Pt_psg01
[NCBI] 		2945965 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URG13114.1 [NCBI]
Genbank nucleotide accession
MW574966 [NCBI]
CDS location
range 40296 -> 41678
strand +
CDS
ATGAGCGAAGTAAAAGTAAATAAAATTAGTCCACGATCCGGAACAACGGTAACACTAGGAGATAGTGGCGATACGTTCACAATTCCTAGTGGTGCAACAATTACTAATAGTGGTACGGCGGCAGGGTTCGGTTCTACAGGTGAGATATCTTGGGATACTACTAAAAAGACATCAACTTTTACTGCAGTATCAGGAGTTGGTTATTTTTGTGATACTTCAGGTGGAGCAATTACAGTTAATTTACCGGCAGGAACTGCAGGAAATTCTTTTGCAGTTGCAGATTATACAAATACATTTCAAACAAACAATCTAACAATTTCACCAAATGGTTCACAAAAAATTGGTGGAACAGCAGAGGATGCAGTATTAAGCACCGAAGGACAATCTGCATATTTTGTATACGTAGATGATACAGAAGGTTGGAAAAATGTTATTGATTCAACGTCTAATATTGTAGGTGCACCACCTTATATTGTAGCAACGGGTGGTACAATTACAACTTCAGGAAATTGCAAAATTCATACTTTTACAGGTCCAGGCACCTTTACAGTATGTACAGCTGCAGCTAATGCAGCAGATAATATAGTTTCACACGTCGTTGTTGCGGGTGGTGGTGGTGGAGCTCAATCAAGAGGTGGCGGTGGTGGAGCTGGAGGATTTAGAGAAGTAGTAAGTCCAAGTTCACCTTATACAGGATCTCCATTAAATGGTTATCCAAACTCTCCAAATAGAGTTACAGTTACAGCCACAGCTTTTCCAATTACAGTCGGAGGTGGTGGAGCAGGAGGTACTGATGCAGGACCATCATCTGATGGTATAGGAACTTCAGGATCAAATTCAGTTTTCTCAACAATAACATCTGCAGGTGGTGGTGGTGGTGCTCCAGGTGATGCAAATAATCCTCCTTATGGACCTGTACCAGTTCAAAGAACAGGTTTAGCTGGAGGATCTGGCGGAGGTGGTGGTTCAGGAAATGATGGTGGTGGATGTGGTGGAGCAGGTAATACTCCTCCTGTTAGTCCTGCACAAGGTTTTGTTGGTGGTAATGCGTGTGGCAGTAGTGTAAAAAGTGCTGGTGGTGGTGGAGCTACAGCAGCAGGTGCTTTTGGACCACCAGGTGGATGTGGTGGAGCTGGAGCAACAAGTTCAATTAATGCAACACCAACTGCAAGAGCAGGTGGTGGTGGAGGTGGTCAAGGTGGAGGTCCCTCTAGCGGACGTGCTGGTGGAGCAGGTGGTGGAGGTCCTGGTGGTGGTACAGGTAATGGTGATGCAGGAACAGTCAATACTGGCGGTGGTGGTGGAGGCGGTGGTAATCCAAGTGGACGAGACGGTGGTGCTGGCGGTTCAGGAATTGTTATTATTAGATATAGATTTCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
78c5115e595b7d439dfa7706065e21c2d8c169e23d35349311650931dec6c0cd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7653
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Global distribution of Type-VIII Secretion System operons transferred between Myo and Podoviruses of the dominant marine bacterium SAR11 Wittmers,F., Needham,D.M., Hehenberger,E., Giovannoni,S.J. and Worden,A.Z. 2011-12 — GenBank