Protein

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Genbank accession
YP_214591.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TSP
Evidence RBPdetect2
Probability 0,57
Protein sequence
MGGTPQTVGQVNVSTGHTLEIEGTLKFAHRGAHRVPTGTTAERPSVSNSKVGQIRFNTTTASFEVYNNSTWISVGVAGSAGNTAGNYSTPARNGREIKQAGRPSGYYWIQPIGYDSPTYCYVDCDNYDGGWVCVMTAGSSSTNHYGIFEADNLYSQTIDGVTAQYVPVSGNYYSSTNGRKYADTFIRDVCSKANGGEETINVRLAKNNTQPPGGVYDTYNGGTVANDEWNYASFIKYRGGIQYHSALNTGGDGRQGDRREGNFRVSHVYPYNWEQPGGWENIRLYDNNYKIFDYHSNPSGNQTSRYSNNRVLWGYTGNTSQGIYGAGPASGQGHPGYFFVR
Physico‐chemical
properties
protein length:341 AA
molecular weight: 37317,99270 Da
isoelectric point:7,66976
aromaticity:0,13196
hydropathy:-0,73460

Domains

Domains [InterPro]
DC_0522
ATT
2–107
DC_0522 DC_2300
G3DSA:2.60.120.1000
STR
77–177
G3DSA:2.60.120.1000
IPR036056
STR
83–143
IPR036056
YP_214591.1
1 341
Architecture
ATT
STR
RBD
ATT 2-107 | STR 108-177 | RBD 178-341
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_214591.1
1 341
Domain Start End Length (AA) Confidence
N-terminal 1 150 150 0,0386
Central domain 151 330 181 0,1509
C-terminal 331 341 10 0,9321
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-150
Central
151-330
C-terminal
331-341

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM4
[NCBI] 		268747 Uroviricota > Caudoviricetes > Pantevenvirales > Ronodorvirus > Ronodorvirus ssm4
Host Prochlorococcus
[NCBI] 		1218 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae >
Host Prochlorococcus marinus str. NATL2A
[NCBI] 		59920 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_214591.1 [NCBI]
Genbank nucleotide accession
NC_006884 [NCBI]
CDS location
range 29427 -> 30452
strand +
CDS
ATGGGCGGTACTCCGCAAACTGTAGGGCAGGTCAATGTTTCGACTGGACATACCCTAGAGATTGAAGGTACTCTGAAGTTTGCTCATAGAGGTGCACACAGAGTTCCTACTGGCACAACTGCAGAAAGACCTAGTGTATCTAATAGTAAAGTAGGACAAATAAGATTTAATACTACAACTGCTTCATTTGAAGTTTATAATAACAGCACATGGATAAGTGTAGGAGTTGCAGGTTCAGCAGGTAATACTGCAGGTAATTATAGTACACCTGCTAGAAATGGTAGAGAAATAAAACAGGCAGGTAGACCCTCTGGTTATTATTGGATACAACCCATAGGATATGATTCTCCAACATATTGTTATGTTGATTGTGATAATTATGATGGTGGATGGGTATGTGTTATGACTGCAGGATCGTCATCAACTAATCATTACGGAATATTTGAAGCAGATAATTTATATTCTCAAACAATTGACGGTGTGACAGCACAATATGTTCCTGTATCTGGTAATTATTATAGTTCAACAAATGGTAGGAAGTATGCTGATACATTCATTCGTGATGTATGTTCAAAAGCTAATGGTGGTGAAGAGACAATAAATGTAAGACTAGCAAAGAATAATACACAACCACCAGGCGGTGTGTACGATACTTATAATGGTGGCACAGTAGCAAATGATGAGTGGAACTATGCTTCATTCATCAAATATCGTGGTGGTATTCAATACCATAGTGCGTTAAATACTGGTGGGGATGGTCGTCAGGGTGACAGACGAGAAGGAAACTTTAGAGTTTCTCATGTATATCCTTACAACTGGGAGCAACCTGGTGGATGGGAGAATATTAGATTATATGATAACAATTATAAAATATTTGATTATCACTCAAATCCATCTGGCAATCAGACATCTCGTTATAGTAATAATAGAGTTCTGTGGGGTTATACTGGTAATACCTCTCAGGGTATCTATGGTGCAGGTCCTGCAAGTGGTCAAGGTCATCCAGGTTATTTCTTTGTAAGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fbea5eb1dab1ca767c1d532d6566583f27b2055cb2616514c2213f797bee7639
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5130
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50