Protein

View in Explore
Genbank accession
QBX25963.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MGIIAAGQITVVDLSDAPVLNAFITANRPTTQVYSQTSGSYNPSYASTPQTLTLNLTKAGSTASIVGGVSGLRWYVVDGATKTEITSKVNTDNEFVSGTNNENLTTKLNIDTDRGSKRYEAAGIWKDPITGLDVQFSADIDLFLTQVGKEAQVLNVYAGNGNTFRNNLPASLTVNADLYRGNVLTNDKKIFKFFYQDTSITGSTVAGYDPDGGIGWHLCNNGSSATEGQTPNVKPTEPTTGQGVLTVSPSKVTNAQSFKVVCINRIDNTKTTGLCTLLDMSDPYSLMLDSSAGNIFKNRQGSTALKARLYRNGEELDANGTGKTYKWSKYDKNGVMDVNFGGGGNAYKTGKTINVNATEIVAKASFKCEVWE
Physico‐chemical
properties
protein length:372 AA
molecular weight: 39831,90760 Da
isoelectric point:6,63012
aromaticity:0,08333
hydropathy:-0,35027

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX25963.1
1 372
Domain Start End Length (AA) Confidence
N-terminal 1 24 24 0,9707
Central domain 25 251 228 0,6579
C-terminal 252 372 120 0,2968
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-24
Central
25-251
C-terminal
252-372

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan284
[NCBI] 		2548093 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus lutetiensis
[NCBI] 		150055 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25963.1 [NCBI]
Genbank nucleotide accession
MK448898 [NCBI]
CDS location
range 29703 -> 30821
strand +
CDS
ATGGGAATTATCGCGGCAGGACAGATAACAGTCGTAGACTTGTCAGACGCGCCTGTACTGAATGCGTTTATCACAGCTAATAGACCTACAACGCAAGTTTATAGTCAAACGTCTGGAAGTTATAATCCATCTTATGCCTCAACACCTCAAACGTTAACACTTAACTTAACTAAAGCTGGCTCAACAGCAAGCATTGTCGGCGGTGTTAGTGGCTTACGCTGGTATGTTGTGGACGGTGCCACAAAAACAGAAATAACGTCAAAAGTTAATACTGATAACGAGTTTGTTTCAGGCACTAACAATGAGAACTTGACCACTAAGCTAAATATTGACACAGACAGAGGCTCGAAGCGCTATGAGGCAGCTGGAATTTGGAAAGACCCAATCACTGGTCTGGACGTTCAGTTCAGTGCTGACATTGACCTGTTTTTAACACAGGTTGGGAAAGAGGCACAGGTTTTGAACGTTTATGCTGGAAATGGTAATACGTTCCGAAACAACTTACCTGCCAGCCTCACAGTCAACGCAGACCTTTATCGTGGGAATGTGTTAACGAATGATAAAAAAATATTCAAGTTCTTTTACCAAGACACGAGCATTACTGGCAGCACAGTAGCTGGTTATGATCCTGACGGCGGCATTGGATGGCATCTATGCAATAATGGCAGCAGCGCCACTGAAGGTCAAACGCCAAACGTGAAGCCGACTGAGCCAACGACTGGGCAAGGCGTCCTCACTGTATCGCCAAGCAAAGTAACTAACGCACAAAGTTTCAAAGTCGTATGCATTAACCGAATCGACAACACAAAAACAACAGGTCTATGCACTTTGTTAGATATGTCAGATCCATACAGCTTAATGCTTGATTCAAGTGCCGGAAACATTTTCAAAAACCGTCAAGGGTCAACTGCACTGAAGGCGCGTCTTTATCGAAACGGCGAAGAGCTTGACGCAAACGGCACAGGTAAGACTTACAAGTGGTCGAAATATGACAAAAACGGTGTTATGGATGTCAATTTTGGCGGTGGAGGCAATGCATACAAAACTGGCAAAACAATTAATGTTAACGCTACTGAAATTGTAGCTAAAGCTAGCTTCAAATGTGAAGTCTGGGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5dbef2975e2087bb6a8b85057f6293178929f915e15460ebebd1ad8cc1b36178
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8209
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank