Protein

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Genbank accession
WCZ56434.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLNDLQVAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDVGFSPASFNFTTGGTLGADDADKAVLWPIEDGGDGNYYVWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYNFSNNETVNFGGKTLTIDCKAKFIGDGNLVFTQLGRGSVVVGAFMESVTTPWVIKPWTDDNQWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKGQSISSTLEIRECTGVEVHRASGLMACFLFRGCHFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFARDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDTNPEDDRPGDFPISQYPVHMLPLNHLIDNLFVRGSLGVGFGMDGQGLYVSNITVEDCAGSGAYILAHETVFTNIAIIDTNTKNFPANQIYISGACRVNGLRLVGIRSTTEQGMTIDAPNSTVSGITGFVDPSRINVANLMEEGLGNSRINSFNNDSAALRFRIHKLSKTLDSGSVYSHINGGPGSGSAWTEITAIAGSLPDAVSLKINRGDYRAVEIPVSVSVLPDNAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 72904,55240 Da
isoelectric point:4,96991
aromaticity:0,08918
hydropathy:-0,15307

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–135
G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
93–132
IPR040775 IPR015331
IPR012332
STR
136–684
IPR012332
IPR015331
RBD
138–684
IPR015331
WCZ56434.1
1 684
Architecture
ATT
STR
ATT 65-135 | STR 136-684
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCZ56434.1
1 684
Domain Start End Length (AA) Confidence
N-terminal 1 155 155 0,9926
Central domain 156 597 443 0,9863
C-terminal 598 684 86 0,8470
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-155
Central
156-597
C-terminal
598-684

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K2
[NCBI] 		3027608 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ56434.1 [NCBI]
Genbank nucleotide accession
OQ291020.1 [NCBI]
CDS location
range 22857 -> 24911
strand +
CDS
ATGTCTAGCGGTTGCGGTGATGTATTGTCACTTAACGATTTACAGGTAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGCAAACAGGGTGGTGTAGCGGGTGGCGCAGATATCGACTACGCTACTAACCAGGTAACCGGGCAGACGCAGAAGACCCTGCCCGCGGTTTTACGTGATGTTGGTTTCTCCCCAGCATCTTTCAACTTCACAACCGGCGGGACCCTGGGAGCTGACGACGCGGATAAAGCGGTTCTTTGGCCTATTGAGGACGGCGGAGACGGTAACTATTACGTATGGCGCGGGTCACTCCCTAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACGGGCGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGGGATATCACCTTTCGCGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGTTGTCGGATTTTACCACTTTACAGCAATTAGCTGATGCTGCCGTCGACAGCGTTCTTATCGACCGTGACTACAATTTCAGCAATAACGAAACCGTTAACTTCGGCGGTAAGACCCTGACCATAGACTGTAAAGCGAAGTTTATTGGCGACGGTAACCTTGTTTTCACACAACTCGGTAGAGGGTCGGTTGTGGTCGGCGCTTTTATGGAGAGTGTCACAACGCCGTGGGTGATTAAACCGTGGACTGACGATAATCAGTGGATAACAGACCCGGCAGCAATCGTGGCCACACTTAAACAGTCTAAAACAGATGGATACCAGCCGACGGTAAACGATTACGCCAAGTTTCCGGGTATAGAATCCCTTCTCCCTCCGGAGGCTAAAGGGCAAAGCATCTCCTCTACCCTGGAAATTCGGGAATGTACAGGCGTCGAGGTTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGCGGATGCCATTTCTGTAAGATGGTAGACGCTGACAACCCGAGCGGCGGAAAAGACGGCGTAATTACCTTTGAAAACCTGAGCGGCGATTGGGGCAAGGGTAACTATGTTATTGGTGGGCGCACAAGTTACGGTTCGGTAAGTAGCGCTCAATTCTTACGAAACAATGGCGGTTTCGCGCGCGATGGCGGGGTCATCGGGTTTACTTCGTATCGTGCGGGGGAAAGTGGTGTTAAGACGTGGCAAGGTACGGTAGGTTCTACGACCTCTCGTAACTACAACCTGCAATTCCGGGATTCAGCAGTGCTATACCCTGTATGGGACGGCTTCGATTTAGGCGCAGATACTGACACGAACCCCGAAGATGACCGCCCAGGGGATTTCCCCATTTCTCAGTACCCGGTACATATGCTCCCATTAAACCATTTGATAGACAATCTATTTGTTAGAGGTTCGCTGGGGGTAGGTTTCGGTATGGACGGGCAAGGTCTGTATGTCTCTAACATAACTGTCGAGGATTGCGCTGGTTCTGGGGCTTATATTCTTGCCCACGAAACAGTATTCACTAATATCGCAATAATCGACACCAATACTAAAAACTTCCCCGCGAACCAGATATATATCTCGGGGGCCTGTCGTGTAAACGGCCTTCGTTTGGTCGGCATCCGTTCAACTACCGAACAGGGCATGACGATAGACGCACCTAACTCCACTGTAAGCGGAATAACGGGCTTCGTGGACCCCTCAAGGATTAACGTAGCCAATTTGATGGAGGAAGGTCTTGGTAACTCTCGCATAAACAGTTTCAATAATGATTCTGCGGCGCTTCGGTTTCGCATTCATAAACTGTCAAAAACCCTTGATAGTGGGTCCGTGTACTCCCACATTAACGGCGGCCCTGGTTCCGGCTCAGCCTGGACCGAAATTACCGCTATTGCGGGGTCATTGCCGGATGCCGTGTCGTTAAAAATAAACAGGGGCGATTATCGCGCTGTTGAGATACCTGTATCGGTGTCCGTCCTACCAGACAACGCTGTCAGGGATAATGGGTCTATATCACTGTATCTGGAAGGCGATAGCCTTAAGGCGTTAGTTAAGCGGGCCGATGGAAGCTATACAAGATTAACTTTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9817a39912ffccc0ccedc656aa71138ee308cb7cb2eb898a3b2594c3b8366155
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K2 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank