Protein

Genbank accession
AGG54640.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MAIHAPSAHNIVQSVKFTLPQYSVYLPAYGNNNSNYRQWSNVTVSITPKFANSHIIIWQKCEIQGNSSHGYLTWKRGGTSGTWLHTDTSAGGASGSDGLYVNHDNEHDNYESSVVIFEDSDPGYTLGNSITYVPYIAFWAADTFWAGSYQNNGNGQVNQGYHGYLQEIAYT
Physico‐chemical
properties
protein length:171 AA
molecular weight: 18956,35170 Da
isoelectric point:5,62714
aromaticity:0,14620
hydropathy:-0,49357

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-GSP1
[NCBI] 		382262 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Prochlorococcus marinus subsp. pastoris str. CCMP1986
[NCBI] 		59919 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG54640.1 [NCBI]
Genbank nucleotide accession
HQ332140 [NCBI]
CDS location
range 24398 -> 24913
strand -
CDS
ATGGCTATACATGCACCTTCTGCTCATAACATTGTACAAAGTGTAAAGTTTACTTTACCTCAGTATTCTGTGTACTTACCTGCATATGGTAACAATAACAGTAATTATAGACAGTGGTCTAATGTTACTGTAAGTATCACTCCTAAATTTGCTAATAGTCATATAATTATTTGGCAAAAGTGCGAGATTCAAGGTAACTCATCTCACGGTTATTTAACTTGGAAGCGTGGAGGCACAAGTGGTACATGGTTACACACAGACACAAGTGCGGGTGGAGCATCAGGTAGTGATGGTCTTTACGTAAACCATGATAATGAGCATGATAACTATGAATCATCAGTTGTCATATTTGAAGATTCAGATCCGGGTTATACTCTTGGAAACTCGATTACATATGTACCTTACATAGCTTTTTGGGCTGCTGATACATTTTGGGCTGGAAGTTATCAAAACAACGGTAACGGACAAGTTAACCAAGGTTATCATGGTTACTTACAGGAGATAGCATACACATGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
0acd6cafd3337065319b88357dd030e32e4277fea2e92be1c0344765443f3107
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7045
Evidence 0,7045
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-GSP1 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank