Protein

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Genbank accession
URY10730.1 [GenBank]
Protein name
non-contractile tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPMVFLKTLGGSGDLGQAPFIHLINRDENEQYYAVFTGTGIRVFDLAGNEKQVRYPTDGASYITTSNPRNDLRMVTVADYTFIVNRNVRVARNTNAVNLAGFNPKKDALINVRGGQYGRTLQIQINGGTQASYQIPDGSQPAHVNNTDAQWLAEELARQLRANTPGWTFNVGQGFIHIIADAAGEINSLVTKDGYADQLINPVTHYAQSFSKLPPNAPDGYMVKIVGDASKSADQYYVRYDATRKVWVETLGWNVNNQLLWETMPHALVRAADGNFEFRWLEWSSKTCGDDDTNPWPSFMDSTINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSKSVELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITAHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSINSDMYIILRNEFNTFLARVSFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPAIYGANFGRGKITVLEPDGKITVFEQPTAGWNNDPWLRLSGNLEGRTVYIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEESGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLGTGQYRFPVVGNAKFNTVSILSDETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:795 AA
molecular weight: 89137,64360 Da
isoelectric point:5,73064
aromaticity:0,11950
hydropathy:-0,34855

Domains

Domains [InterPro]
IPR058003
TTP
1–795
IPR058003
URY10730.1
1 795
Architecture
TTP
TTP 1-795
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URY10730.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9928
Central domain 141 349 210 0,2180
C-terminal 350 795 445 0,2013
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-349
C-terminal
350-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage ESh3
[NCBI] 		2950776 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sp.
[NCBI] 		625 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URY10730.1 [NCBI]
Genbank nucleotide accession
ON528717 [NCBI]
CDS location
range 22095 -> 24482
strand +
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGCCAACAGCCGGACATCCTTCGTTATCCAGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTATGGTTTTCCTTAAGACCCTAGGAGGAAGTGGCGACTTAGGACAAGCTCCATTCATTCACCTGATAAACCGCGATGAGAACGAACAGTATTACGCTGTGTTTACTGGCACAGGAATCCGAGTGTTTGACCTCGCTGGCAACGAGAAACAGGTACGATACCCTACAGATGGTGCTTCGTATATCACCACTTCAAACCCAAGGAATGACTTGAGGATGGTCACTGTGGCTGACTATACGTTCATCGTTAACAGAAACGTAAGGGTAGCGCGTAATACCAACGCGGTAAACCTTGCTGGGTTTAACCCTAAGAAGGACGCATTAATCAACGTTCGTGGTGGTCAGTACGGCAGAACACTACAGATTCAGATAAATGGTGGAACACAAGCAAGCTATCAGATTCCTGATGGCTCACAGCCAGCGCATGTTAATAACACCGACGCTCAATGGCTTGCTGAGGAACTTGCACGACAACTTCGGGCAAATACTCCCGGATGGACCTTTAACGTTGGACAGGGTTTCATTCACATTATTGCTGACGCTGCTGGTGAGATTAACTCCCTAGTGACTAAGGACGGTTACGCTGACCAGCTAATTAACCCTGTTACTCACTACGCTCAGTCGTTCTCTAAGTTGCCACCTAACGCTCCTGATGGATACATGGTGAAAATCGTAGGGGATGCGTCAAAGTCTGCTGACCAATATTACGTCAGATATGATGCTACTCGCAAAGTATGGGTTGAGACCTTGGGGTGGAACGTTAACAATCAGCTTCTGTGGGAAACGATGCCACACGCGTTGGTACGCGCTGCTGATGGTAACTTTGAGTTCAGATGGCTTGAGTGGAGTTCGAAAACCTGTGGTGACGACGATACAAACCCATGGCCTTCCTTTATGGACTCCACAATCAACGATGTGTTCTTCTTCCGCAACCGTTTAGGTTTCCTTAGTGGGGAGAATATCATCTTGAGTAGAACCGCTAAGTACTTTAACTTCTACCCAGCGTCAATCGCGAACTTGAGTGACGATGACCCTATTGACGTGGCTGTAAGTACCAACCGAATAGCAATCCTTAAGTATGCCGTTCCGTTCTCAGAAGAGTTACTCATCTGGTCCGATGAAGCACAATTCGTACTGACTGCTTCTGGTACCCTCACATCGAAGTCAGTCGAGTTGAACCTGACGACCCAGTTTGATGTGCAGGACCGAGCGAGACCTTTTGGTATTGGGCGTAATGTCTATTTTGCTAGTCCGAGGTCCAGCTTCACGTCCATCCACAGATACTACGCTGTACAGGATGTAAGTTCCGTTAAGAACGCTGAGGACATTACGGCACACGTTCCTAACTACATACCAAATGGTGTGTTTAGTATTTGTGGTAGTGGTACGGAAAACTTCTGTTCGGTACTATCTCACGGTGACCCTAGCAAAATCTTCATGTACAAATTCCTGTACCTGAACGAAGAGTTACGGCAACAGTCGTGGTCTCACTGGGACTTTGGGGAAAACGTGCAGGTTTTGGCGTGTCAGAGCATCAACTCAGATATGTACATTATCCTACGTAACGAGTTCAATACGTTCCTTGCGAGAGTTTCCTTTACGAAGAACGCCATTGACTTACAGGGAGAACCTTATCGGGCATTTATGGACATGAAGATTCGCTACACGATTCCTAGTGGAACATACAATGATGACACGTTCACTACCTCTATCCATATTCCAGCCATTTATGGCGCGAACTTCGGGAGAGGCAAAATAACTGTATTGGAGCCTGATGGTAAGATAACCGTATTTGAGCAACCTACGGCTGGGTGGAACAATGACCCATGGTTGAGACTAAGTGGTAATTTAGAGGGACGAACTGTATACATTGGGTTCAACATTAACTTCGTCTATGAGTTCTCTAAGTTTCTCATCAAGCAGACTGCCGACGACGGGTCTACCTCCACGGAAGACATTGGTCGCTTACAGTTACGCCGAGCGTGGGTTAACTATGAGGAATCTGGTACGTTCGACATTTATGTTGAGAACCAATCATCCAATTGGAAGTATACAATGGCTGGTGCTCGCTTAGGCTCTAACACTCTGAGGGCTGGGCGATTGAACTTAGGGACAGGCCAATACAGATTCCCTGTGGTTGGTAACGCAAAGTTCAATACCGTGTCCATCTTGTCTGACGAGACTACCCCGTTGAACATCATTGGATGTGGCTGGGAAGGTAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
94f6e6aa016ad0230a515da8ee24940a9c03ce998f0f02e8f82f8c0e29b11c5c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3260
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Design of a bacteriophage cocktail active against Shigella species and testing of its therapeutic potential in Galleria mellonella Filippov,A.A., Su,W., Kevorkian,R.T., Sergueev,K.V., Srijan,A., He,Y., Lurchachaiwong,W., McGann,P.T., Ellison,D.W., Swierczewski,B.E. and Nikolich,M.P. — — GenBank