Protein

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Genbank accession
XBS47643.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTTVTQATRLIKVGAEGQANTYPVYLSQVRTDNPNTSFPDECDSDYLATLGYFPVADVAQPAGDVVTEGDPAFANGVWSQAWVVRSFTADEVAANLASTKSAMMDDINNKLDAALQKGFQFAFSDTPGHVQLRDGDRGNIASARIRADALTTQGTTDPVMPFRDWENVTHMCTPAQIVSLSDAAYEAYLGFLGAGWTLKDAVTKAATAADLPAVPAEITLPQS
Physico‐chemical
properties
protein length:223 AA
molecular weight: 23771,15810 Da
isoelectric point:4,32729
aromaticity:0,08520
hydropathy:-0,14619

Domains

Domains [InterPro]
DC_0635
STR
1–156
DC_0635
IPR025484
STR
100–210
IPR025484
XBS47643.1
1 223
Architecture
STR
STR 1-210 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage vB_BgluM-SURPRISE13
[NCBI] 		3159457 No lineage information
Host Burkholderia glumae LMG 2196 = ATCC 33617
[NCBI] 		1176492 Pseudomonadota > Betaproteobacteria > Burkholderiales > Burkholderiaceae > Burkholderia > Burkholderia glumae LMG 2196 = ATCC 33617

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XBS47643.1 [NCBI]
Genbank nucleotide accession
PP856017.1 [NCBI]
CDS location
range 157524 -> 158195
strand -
CDS
ATGACGACTGTCACCCAAGCAACGCGCCTGATCAAAGTCGGCGCAGAAGGTCAAGCGAACACTTACCCGGTTTATCTGAGTCAGGTTCGCACCGACAACCCGAATACTTCGTTCCCGGACGAATGCGATTCGGACTATCTCGCAACCCTCGGCTACTTCCCCGTCGCAGACGTGGCGCAGCCGGCCGGCGATGTCGTAACCGAAGGCGATCCTGCTTTCGCGAACGGCGTGTGGTCGCAAGCATGGGTTGTGCGTTCTTTCACGGCTGACGAAGTGGCGGCGAATCTGGCTTCCACCAAATCAGCCATGATGGACGACATCAACAACAAGCTGGATGCTGCCCTGCAAAAGGGTTTTCAGTTCGCATTCAGCGACACTCCGGGTCACGTGCAATTGCGTGATGGCGATCGTGGTAACATCGCCAGCGCCCGCATCCGCGCGGATGCACTGACCACCCAGGGAACCACGGATCCGGTCATGCCGTTCCGTGACTGGGAGAACGTAACCCACATGTGCACTCCGGCACAGATTGTGTCGTTGTCGGATGCAGCCTACGAAGCGTATCTTGGCTTCCTGGGTGCTGGGTGGACGTTGAAGGATGCTGTCACCAAAGCAGCAACGGCTGCAGATCTTCCTGCCGTTCCGGCGGAGATCACGCTTCCGCAGTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c10a4c1a48a48af9d8b0871469a2be96b90fc6af86888b6bb8fe825e0c140408
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9487
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of the novel Burkholderia jumbo bacteriophage Surprise13 Supina,B.S.I. and Dennis,J. 2023-10-26 — GenBank