Protein

View in Explore
Genbank accession
XGT88831.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,79
TSP
Evidence RBPdetect2
Probability 0,89
Protein sequence
MATNPTNNPIPSEDPRDLKFNAGKIDEEVNGSADYYTDRFGVQRLTNAGRNHQFQDAQAERSSLFTEQLTSQEEEFTTQLSGQEDQFNQQISEQHSEFTAQITEQRNEFNDMLAASGYSWLADYVDGPVTFTNRSQVTVYNGVAYRLSAATDIPFTTTGNNATSWANDSTHLVAIGDNDIRQQVQYQFGQWLPSVAAALISNDTYSSIRTRGFYAPNDGGDGVWIATGNTVPSKAGTHDPAKARIYNANGVEYQLNVQSGFEINAKANGVNAVDDVDAETEDFVCLGQAINGITSRVKTMVNDEDLKTYLKVTIPSEYPLRIGKSSIKAYSRLKLDFQQANIYVRPSPSNRQEVTGVYMNAIERGIEDIQAISAKFSGATSYSNMTLSDFHIEGGKLYGDHTTDKGVADCSTGTGLFTYNMENSSIRNTWFQGFACGRQYNRTGPGYYFDNLGNKVVGTLVPEVTTSGTGSYEGVKEWSVTAYGCRYLYLRVLSNWARFDNCKFGTYADWSSSPDGNQCEYFIENRGAGVVFSGGVIEANTAAANPTKGYVRDFARGCTFEGVYYENCLSAGWVVAIPEKSQYNRANGLFLTAIGSQFTLSSKGAPLIKFEEGYFGSYNPATGLYETGGWETNYQYAGGVNTWSVGQPVVDSGAFPHGGYDFKYGTYGIHYSGSVPDVDSLRDTPEGNEFLSPYGLPVNSGILLFTTLSPAYQSNIVVWYKDLTGNFDPRNIVVGNFDNNNVSDGTSNALYRTNGFHYYDYGNGYKAAIVPYVNPRALDNRMTTSAGRKLKITVTSDAPIILKNIQAFVGGTPLFPPALKEYVPRSQRDRAWGTMSAGSTDSGAYYGPLVGGGIFRPGDVVLPFVPFSNAALMNPASYTDISAGYGSNTDTAVITGGAAWGAGLAGATFTLTVEAQDTTNNWTTVSVPSAYLPYVFTGMPVNVTANSSGGATGLINTVRRIINSDGTMSNKYVLSGALGAAGTTLTASTNGSYTVRSGVSSTLTGVSGSFSVSSWLGTASGDLRVGFGASGSGTRQTRYYYNGTDVSAVVGSSAANALHLTGTGGITLNGSLLTSTSYSFGSASAYPANIYSQNAVTVVSDERYKTDIVELSDAEIECAKACAKLYRRYKLNTAIALKGEDGARYHVGTIAQLVMQAFTDAGLDWTKYGIITYESWEASDAVVETVGAVYDEEGNELAPETTIEITPAKEAGEIYMVRYDEFNSFVMAGQEARLQALEEK
Physico‐chemical
properties
protein length:1240 AA
molecular weight: 133857,84870 Da
isoelectric point:4,81411
aromaticity:0,11532
hydropathy:-0,31718

Domains

Domains [InterPro]
DC_1559
ATT
1–229
DC_1559 IPR036388
Coil
Unmapped
88–108
Coil cd10144
IPR030392
CHP
1100–1240
IPR030392
IPR030392
CHP
1100–1163
IPR030392
XGT88831.1
1 1240
Architecture
ATT
RBD
ATT 1-229 | RBD 1088-1240
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XGT88831.1
1 1240
Domain Start End Length (AA) Confidence
N-terminal 1 275 275 0,9927
Central domain 276 1006 732 0,9860
C-terminal 1007 1240 233 0,9420
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-275
Central
276-1006
C-terminal
1007-1240

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpS_GP-1
[NCBI] 		3146124 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XGT88831.1 [NCBI]
Genbank nucleotide accession
PP454752.1 [NCBI]
CDS location
range 30586 -> 34308
strand +
CDS
ATGGCTACTAACCCAACTAATAACCCAATCCCTTCTGAAGACCCGCGCGACCTGAAATTTAACGCCGGGAAAATTGATGAAGAAGTTAATGGCAGTGCTGATTACTACACCGACCGATTCGGAGTACAGCGCCTGACCAATGCCGGGCGCAACCATCAGTTTCAGGATGCTCAGGCTGAAAGATCTTCCCTTTTCACAGAGCAGCTCACCAGCCAGGAAGAAGAATTCACAACTCAGCTTTCAGGGCAGGAAGACCAATTCAATCAACAAATATCTGAACAACATAGCGAGTTTACGGCGCAAATCACAGAGCAGCGTAACGAATTCAACGACATGCTCGCGGCCTCGGGCTATTCATGGCTGGCTGATTATGTTGATGGCCCCGTAACGTTCACTAATCGTAGCCAGGTCACAGTCTATAATGGCGTGGCATATCGTCTATCCGCGGCGACCGACATCCCATTCACGACAACAGGGAATAATGCTACTTCCTGGGCGAATGACTCAACGCATCTTGTAGCTATCGGCGATAATGACATCCGGCAACAAGTGCAATATCAATTCGGTCAGTGGCTCCCGTCAGTGGCCGCCGCGCTCATCTCCAATGACACCTACTCTTCTATCCGCACCCGTGGCTTCTACGCTCCAAATGATGGAGGAGATGGGGTATGGATCGCCACTGGTAACACCGTCCCGTCTAAGGCGGGTACCCATGACCCCGCAAAGGCCAGGATCTACAATGCCAATGGTGTGGAGTACCAACTTAACGTACAGTCAGGTTTTGAGATTAATGCTAAAGCCAACGGTGTTAATGCAGTTGATGATGTTGATGCCGAAACTGAGGACTTTGTTTGTCTCGGACAGGCTATAAATGGCATAACCTCACGCGTCAAAACTATGGTCAACGATGAAGACCTGAAGACGTACTTAAAAGTTACTATACCATCCGAGTACCCATTGCGTATTGGTAAAAGCAGTATCAAGGCGTACTCCCGCTTGAAATTAGATTTTCAGCAGGCAAATATTTACGTTCGTCCAAGTCCGTCAAATCGTCAGGAAGTCACCGGCGTTTACATGAACGCCATCGAGCGTGGCATTGAAGATATTCAGGCAATCTCTGCGAAGTTTAGTGGCGCAACGTCTTATTCAAATATGACTCTCTCTGACTTTCATATCGAAGGGGGTAAGTTATACGGAGACCATACCACTGATAAGGGCGTTGCAGATTGTAGCACTGGTACAGGCCTGTTTACGTATAACATGGAAAACTCCAGTATTCGTAATACGTGGTTCCAGGGATTTGCTTGTGGTCGTCAGTACAACCGTACTGGTCCTGGGTATTACTTCGATAACTTAGGTAATAAAGTAGTTGGTACCCTGGTTCCAGAAGTTACCACATCTGGTACTGGTTCCTACGAAGGCGTTAAGGAATGGTCTGTCACTGCGTATGGCTGCCGCTATTTGTACCTGCGCGTTCTCAGTAACTGGGCACGGTTCGATAACTGCAAATTCGGTACCTACGCTGACTGGTCATCAAGCCCTGACGGCAACCAGTGTGAATACTTCATCGAGAACCGGGGCGCCGGTGTAGTGTTCAGCGGTGGCGTAATTGAGGCGAACACGGCGGCTGCCAACCCTACTAAGGGTTATGTGAGGGACTTCGCGCGCGGGTGTACGTTCGAAGGCGTTTACTATGAAAACTGCCTGTCGGCTGGGTGGGTCGTAGCCATCCCTGAAAAGAGCCAGTACAACCGAGCTAATGGCCTGTTCCTTACGGCTATCGGCAGTCAGTTTACCTTATCGTCGAAGGGTGCCCCCCTGATTAAGTTTGAAGAGGGGTATTTTGGGTCATACAACCCTGCTACAGGCTTGTATGAAACAGGCGGTTGGGAAACCAATTACCAGTACGCGGGTGGGGTTAATACCTGGTCTGTGGGTCAGCCTGTGGTAGATTCTGGGGCTTTCCCTCACGGTGGGTATGACTTTAAATATGGTACTTATGGTATTCACTATTCTGGCAGTGTACCGGATGTGGATTCCCTACGGGACACTCCAGAGGGCAATGAGTTTCTGTCGCCTTATGGCTTACCGGTTAACTCGGGCATTCTGTTATTCACCACCTTATCCCCGGCGTATCAGTCTAATATCGTAGTTTGGTATAAGGACCTGACGGGGAACTTTGACCCGAGGAATATTGTTGTTGGTAACTTCGACAATAACAACGTGTCTGATGGCACCAGCAACGCACTCTACCGTACTAACGGGTTTCACTACTATGATTATGGTAATGGCTACAAAGCGGCTATTGTCCCTTACGTTAACCCTCGTGCATTAGATAACAGGATGACTACATCTGCTGGGCGGAAGTTAAAAATCACCGTAACCAGCGATGCCCCTATTATCCTGAAAAACATCCAGGCATTCGTGGGGGGTACTCCATTATTCCCGCCAGCTCTTAAGGAATACGTACCGCGATCTCAACGGGACCGCGCCTGGGGTACTATGTCTGCTGGTTCTACGGATTCTGGTGCATACTATGGCCCACTGGTTGGCGGGGGTATCTTCCGACCGGGTGATGTGGTGCTACCTTTTGTGCCGTTCAGTAATGCTGCCTTGATGAATCCGGCGTCATATACTGATATTTCCGCTGGGTACGGGTCAAATACAGACACTGCTGTTATTACTGGTGGGGCGGCGTGGGGTGCGGGGTTAGCCGGAGCAACCTTCACGCTTACTGTAGAAGCTCAGGACACGACTAATAACTGGACAACTGTTTCTGTGCCGTCCGCTTATTTGCCGTATGTATTCACAGGTATGCCGGTTAACGTGACAGCAAACTCCTCTGGTGGTGCTACAGGGTTAATAAACACTGTGCGCAGGATTATTAACTCTGACGGGACCATGAGCAATAAGTACGTGCTGTCTGGTGCCCTTGGGGCCGCTGGCACAACCTTAACGGCTTCCACAAACGGTAGCTATACAGTACGCTCTGGAGTGTCTTCAACACTCACAGGGGTTTCTGGCTCGTTCTCTGTTAGCTCATGGTTGGGTACGGCATCTGGGGATTTGCGCGTAGGATTCGGGGCGTCAGGTTCTGGCACACGCCAAACTCGTTACTACTACAATGGTACGGATGTATCTGCTGTAGTCGGCTCCAGTGCCGCTAATGCGTTGCACTTAACAGGCACTGGCGGCATCACCCTTAACGGGTCTTTGCTGACAAGCACCTCCTATTCATTTGGTAGTGCATCGGCATACCCGGCAAACATCTACTCTCAAAATGCTGTGACCGTAGTCTCTGACGAGCGCTACAAAACAGATATTGTTGAGTTATCAGATGCGGAGATTGAGTGTGCTAAAGCCTGTGCGAAGCTGTATCGCCGCTACAAGCTGAATACAGCCATAGCTTTAAAAGGTGAAGATGGTGCCAGATACCACGTGGGAACCATTGCTCAACTTGTGATGCAGGCATTTACTGATGCTGGGTTGGACTGGACTAAGTACGGAATCATTACTTATGAGTCCTGGGAAGCTTCCGATGCAGTCGTTGAAACTGTAGGTGCTGTCTATGATGAAGAAGGTAATGAGTTAGCTCCTGAAACCACCATAGAAATTACCCCTGCTAAAGAGGCTGGGGAAATCTACATGGTTCGCTACGACGAATTTAATAGCTTCGTCATGGCTGGGCAGGAAGCCAGACTTCAGGCTTTAGAGGAGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e5f38f3dc342bc2034a1cd36f37233071d438db5a03b7d4d75232272b2af6672
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5753
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of four novel bacteriophages targeting multi-drug resistant Klebsiella pneumoniae strains of sequence type 147 and 307 Ponsecchi,G., Olimpieri,T., Poerio,N., Antonelli,A., Coppi,M., Di Lallo,G., Gentile,M., Paccagnini,E., Lupetti,P., Lubello,C., Rossolini,G.M., Fraziano,M. and D'Andrea,M.M. 2024 — GenBank