Protein

View in Explore
Genbank accession
QYC52948.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MAEPILMAAFGEDFVETRVLSEANSVKYWLKAYATHSNAVPNKPELNINGAFDMTSSLRRGINVVQVNGDSFINFKTFDVTTDDNNANNKAFVEYANGLTSGLYIIMTHERFQSSPLIDRWFKNKWSASWPGSDFSKSFPNSAYVGVLGAAKGRILIESFYGNDGVVKEDSRAKVDTVYDNVGDVGYTGCPYRSIEDTNEYSDSTGYEYKRYPVQNESISKIADYGLSPGDSVFLVCDMYASKSLLDAGSTTRASLRWFKGTSLLSSSVSLEIPKNGADRWLRFERFTAVPTDADGFTIVVSRYPKTSVVGDSKIKNLVFVQTSHSEKLNSVVQEFGVNGIRMNKGVEGGTTMIMELPNSKVDPSGVIPVQSFRETSD
Physico‐chemical
properties
protein length:378 AA
molecular weight: 41724,15630 Da
isoelectric point:5,34692
aromaticity:0,11111
hydropathy:-0,32011

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYC52948.1
1 378
Domain Start End Length (AA) Confidence
N-terminal 1 66 66 0,5230
Central domain 67 265 200 0,5144
C-terminal 266 378 112 0,4190
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-66
Central
67-265
C-terminal
266-378

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnM_TU02
[NCBI] 		2863278 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYC52948.1 [NCBI]
Genbank nucleotide accession
MZ560702.1 [NCBI]
CDS location
range 140923 -> 142059
strand +
CDS
ATGGCTGAACCAATTTTAATGGCAGCCTTTGGTGAGGATTTCGTGGAAACACGAGTCCTCTCTGAGGCAAACTCTGTGAAGTATTGGCTAAAAGCTTATGCTACGCATTCTAATGCTGTTCCTAATAAGCCAGAATTGAATATTAATGGTGCCTTTGATATGACCTCCTCCTTACGGAGGGGGATTAATGTCGTTCAGGTTAATGGCGACAGTTTTATTAACTTTAAAACATTTGATGTTACCACTGATGATAATAACGCTAATAACAAAGCGTTTGTAGAATATGCAAATGGATTAACTTCAGGATTGTATATTATAATGACACATGAACGATTTCAATCCAGCCCATTAATAGACAGATGGTTTAAAAACAAGTGGTCTGCTTCTTGGCCAGGTTCTGATTTTTCCAAATCGTTTCCAAACTCTGCTTATGTAGGAGTGCTCGGAGCAGCAAAAGGACGCATATTAATTGAGTCATTTTACGGGAATGATGGTGTAGTAAAAGAAGATTCCAGGGCTAAAGTAGATACAGTATATGATAATGTGGGCGATGTAGGATATACTGGATGTCCTTATCGTTCTATTGAAGATACCAATGAATACTCGGATTCTACTGGATATGAATATAAACGTTATCCAGTACAAAATGAATCTATAAGCAAAATAGCTGATTATGGATTATCTCCCGGGGATTCGGTGTTTTTAGTGTGTGATATGTATGCATCTAAAAGCCTTCTTGATGCGGGTTCTACTACTAGAGCTAGCTTGCGGTGGTTCAAGGGTACATCTTTATTATCTTCAAGCGTATCATTAGAAATTCCAAAAAATGGAGCTGATAGATGGCTAAGATTTGAAAGATTTACCGCTGTTCCTACGGACGCTGATGGATTTACTATTGTGGTATCACGATATCCAAAAACGTCCGTAGTTGGTGATTCTAAAATCAAAAACCTTGTATTTGTTCAAACCTCTCACAGTGAAAAACTGAATAGCGTTGTTCAAGAGTTTGGTGTGAATGGTATAAGAATGAATAAAGGCGTTGAAGGAGGAACCACTATGATTATGGAACTTCCAAATTCAAAAGTCGATCCGAGCGGTGTTATTCCAGTTCAATCGTTCAGAGAAACATCAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3ee25a067979518fadb805ba1f877c39797f2225234590b96585f721f1950c74
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6693
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of a novel virulent Klebsiella virus vB_KpnP_TU02 infecting Klebsiella pneumoniae clinical isolate Nepal,R. and Malla,R. 2021-08-16 — GenBank