Protein
View in Explore- Genbank accession
- XUE01497.1 [GenBank]
- Protein name
- tail spike protein
- RBP type
-
TFTSPTSPTSP
- Protein sequence
-
MYVESLEQRKDTYFIDPVEWGIVADRSATAQEQITNALNHAVKEGYKRAYLPKWEYLIDGVSKFGSSPEIGGGVIVPGNIIVDLHQEADFFVKPNDAQGYSVFYIGQVENIELHGGRIFGDRYEHDYSPITEHRKTHEWGFGVHVHGGRNVKIQNVFAKDCTGDNIHINNKGLMNYDGMTYNPSVDVEVLDCVLVKGRRNNLAAVGCDGVTIERSHFIEAGGDTIGPQLGIDFEGYAENGVRYAHPYSLIVKACHFARNGRGAFTSHASGKVIVEGNFSDDRFSYGYGTEIHFKGNQIINDGPTKAGHGIDSVDHPSYDSMNRVILEGNTIKGFENGITARGRSVSVVDNKLYKIKSAGIQIYLCDDALVNDNTVEESDCTPLYILYANGVKAADNTFKGGASQYAVKIVNSDDVSLGGNDLEAFGGISIQESTNVRILGENEIKPTGKGHGVKWDAKSSVRFDDNYIYDAIEYPIVGDCSAGVSSVSNNKIIRCKSLVAIHIKNGSKHTLEGNKISFEKDSTGGYGILLEGTTGTRLIRNDVQTLNGNAIASPYYTTGATKTTLIENTYDTGNIWKNDTDIEIRNERI
- Physico‐chemical
properties -
protein length: 589 AA molecular weight: 64563,04570 Da isoelectric point: 5,47464 aromaticity: 0,09168 hydropathy: -0,39406
Domains
Domains [InterPro]
IPR012334
STR
16–379
STR
16–379
IPR011050
STR
33–399
STR
33–399
IPR006626
Unmapped
108–147
Unmapped
108–147
IPR006626
Unmapped
207–235
Unmapped
207–235
IPR039448
ENZ
336–471
ENZ
336–471
IPR006626
Unmapped
365–387
Unmapped
365–387
DC_0453
RBD
377–586
RBD
377–586
1
589
Architecture
STR 16-587 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
589
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 29 | 29 | 0,9194 |
| Central domain | 30 | 578 | 550 | 0,9967 |
| C-terminal | 579 | 589 | 10 | 0,2681 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-29
1-29
Central
30-578
30-578
C-terminal
579-589
579-589
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage 268TH008 [NCBI] |
3416601 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XUE01497.1
[NCBI]
Genbank nucleotide accession
PV504775.1
[NCBI]
CDS location
range 26756 -> 28525
strand +
strand +
CDS
GTGTACGTGGAAAGCTTAGAACAGAGAAAAGACACATATTTCATCGATCCGGTTGAATGGGGAATCGTTGCGGATCGATCTGCTACAGCGCAGGAACAAATAACAAACGCGCTGAATCATGCTGTTAAAGAGGGATACAAGCGGGCTTACTTGCCGAAATGGGAATACCTCATCGACGGAGTGAGTAAATTCGGTTCATCGCCAGAGATCGGCGGTGGTGTTATTGTTCCGGGTAATATCATCGTTGACTTGCATCAAGAAGCAGACTTCTTTGTGAAACCGAACGACGCGCAAGGTTATTCCGTTTTCTATATTGGACAAGTTGAAAACATAGAATTGCACGGAGGAAGAATATTCGGGGATAGATACGAACACGATTATTCCCCAATCACAGAACACAGAAAAACGCATGAATGGGGATTCGGCGTTCATGTCCATGGCGGCAGAAACGTAAAAATCCAAAATGTGTTCGCCAAAGACTGCACCGGAGACAACATACACATTAACAATAAAGGTTTGATGAATTACGACGGGATGACTTACAACCCTTCTGTAGACGTGGAGGTTCTGGACTGTGTGCTAGTGAAGGGGAGACGGAACAATCTTGCTGCAGTCGGTTGTGACGGTGTGACAATCGAGAGATCGCATTTTATCGAAGCTGGCGGCGATACTATCGGACCACAACTTGGGATCGATTTCGAAGGGTATGCGGAAAACGGCGTCCGATACGCGCACCCTTATTCGTTAATTGTGAAAGCTTGTCATTTCGCCCGTAACGGCAGAGGCGCCTTCACCTCTCACGCATCCGGGAAGGTTATAGTCGAAGGGAACTTTTCTGATGATCGTTTTTCTTATGGGTACGGAACGGAAATCCACTTTAAAGGCAATCAGATCATTAATGACGGACCAACAAAGGCAGGTCATGGCATCGATTCGGTTGATCATCCTAGTTACGATTCGATGAACCGCGTCATTCTTGAAGGAAACACAATTAAAGGATTCGAAAACGGGATCACAGCCAGAGGGCGCAGCGTTTCTGTTGTCGATAATAAATTGTACAAGATCAAAAGCGCCGGGATTCAGATTTATCTTTGTGATGATGCGCTTGTAAATGATAACACCGTTGAGGAAAGCGACTGCACACCGCTTTATATTTTGTATGCGAATGGCGTTAAAGCAGCTGATAATACATTCAAAGGCGGCGCGTCTCAATACGCTGTCAAAATCGTTAATTCCGATGACGTTTCACTAGGCGGCAATGATCTTGAAGCGTTCGGGGGTATATCTATTCAAGAATCCACGAATGTAAGGATTTTAGGGGAAAATGAAATCAAACCGACAGGCAAAGGACACGGTGTAAAATGGGATGCGAAAAGCTCTGTCAGGTTTGACGATAACTATATCTATGATGCTATAGAATATCCAATCGTTGGGGATTGTTCTGCAGGTGTTTCGTCCGTTTCAAACAATAAAATAATCCGGTGCAAATCTCTTGTGGCTATTCATATCAAAAACGGATCAAAACATACTCTGGAAGGTAATAAAATTTCTTTTGAGAAGGATAGTACGGGTGGTTACGGGATTTTGTTAGAGGGAACGACAGGGACAAGGCTTATAAGGAATGATGTCCAAACCCTTAATGGCAACGCTATTGCATCGCCTTATTATACGACAGGGGCAACCAAAACAACTCTAATCGAAAACACATATGACACGGGTAACATTTGGAAAAATGACACCGATATAGAAATTAGAAACGAGCGGATATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
f2f739fa3721d787a518222b4fdeb26bfd906e54ad68176fd2bd3de03e52fb23
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50