Protein

View in Explore
Genbank accession
YP_006561222.1 [GenBank]
Protein name
tail fiber protein and host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,76
Protein sequence
MLPYSNSQWHTYLEYATSTFDFIIPKIVDGKLHDDVKYINDDMLVSFYYDNTYHVFYVSQLVENDDNFQVTCNNTNLELAMESSRPLASSNGAKSLEWYLQNLDLLGYAGLEIGINEISDKTRSITFDSQSGTKLEQLHSLMNQFDAEFIFRTELNRDGTLKKFIIDIYQQPDENHHGIGKVRGDVVLYYQNGLKGVQVASDKTQLFNAGYFVGQEGANLESVEFEEKNELGQVEFYSKKGHPMVYAPLSMEKYPSTLKDSDTDRWTRKDFETEYKDVNALKAYALRTIKQYAYPLLTYTVDIQSSFIENYKDINLGDTVKIVNNNFRGGLTLEARVSEMVISFDMPLNNSVVFTNFRKLDNKPSGSLQQRIDEIVSKSLPYRVEITTTNGTVFKNGVGRSTVRPVLKQGDRTVNATWRFVIDGAIKYVGMTYDMVASQITQPTALTVSAWVDNKEVASEEVTFLNVSDGRNGVKGDKGDPGPAGPKGDRGLQGERGLQGLQGPKGDQGIPGVKGADGKTQYTHIAYADTVSGSGFSQTDTDKAFIGMYQDFSTTDSRNPQDYRWSKWKGSDGRDGIPGKAGADGRTAYVHFAYADSADGRTGFSLTQDGTKRYLGICTDFDKANSTNPADYAWNDTAGSVSVGGRNLLKGSKGPFKPDKKPTNFDNFVLYKSETSVYLEQNQKYLVSAKSDGNFTAFHNGNAESDNVTLWLMDDKIQNYQIVSDLKTGTTGTQITWVKPTGNYHLRVNTYHKTASKSVWEVKIEKGTVKTDWTPALEDVQDDINSKADSVLTQAQLNKLNEVNSVVQAELEAKASLDTLNQWVKAYQDFVNANNANRAQAEKNLADASARVAKLENNLSDMSERWNFIDSYMTSSNEGLVIGKTDNSSSMLFSPNGRISMFSAGNEVMYISQGVIHIENGIFSKTIQIGRYREEQDFINPDRNVIRYVGGS
Physico‐chemical
properties
protein length:952 AA
molecular weight: 106279,77970 Da
isoelectric point:5,28241
aromaticity:0,10399
hydropathy:-0,57132

Domains

Domains [InterPro]
DC_0109
STR
1–952
DC_0109
IPR050149
Unmapped
470–603
IPR050149 Coil
IPR008160
STR
470–519
IPR008160
G3DSA:1.20.5.320
STR
488–542
G3DSA:1.20.5.320
YP_006561222.1
1 952
Architecture
STR
STR 1-952
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage YMC-2011
[NCBI] 		1051631 No lineage information
Host Streptococcus salivarius 57.I
[NCBI] 		1046629 Bacteria > Firmicutes > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006561222.1 [NCBI]
Genbank nucleotide accession
NC_018285.1 [NCBI]
CDS location
range 5 -> 2863
strand +
CDS
ATGTTGCCATACTCAAACAGTCAATGGCACACTTATCTTGAATACGCAACTAGTACATTCGATTTCATAATTCCTAAAATTGTAGACGGGAAGCTACACGACGATGTTAAATATATCAATGATGATATGCTTGTTTCGTTTTACTACGATAACACTTACCATGTTTTTTATGTGTCGCAACTTGTTGAAAACGATGATAATTTCCAAGTAACATGTAACAACACTAACCTTGAGTTAGCTATGGAGAGCTCACGCCCCCTTGCTAGCAGTAACGGGGCTAAAAGTCTTGAGTGGTATCTTCAAAATCTAGACCTTCTAGGATATGCAGGCCTTGAAATAGGGATCAATGAAATTTCAGACAAAACAAGAAGTATCACGTTCGATTCTCAAAGCGGTACTAAATTAGAGCAACTTCACAGTTTAATGAATCAATTTGATGCTGAATTCATCTTTCGTACCGAACTAAACCGAGATGGGACTTTGAAGAAGTTTATCATTGATATCTACCAACAACCAGACGAAAATCATCACGGCATCGGTAAAGTTCGAGGAGATGTTGTTCTCTACTACCAAAACGGCTTAAAAGGTGTTCAAGTTGCTAGTGACAAGACCCAACTATTTAACGCTGGGTATTTCGTTGGTCAAGAGGGGGCTAATCTTGAAAGTGTAGAGTTTGAGGAAAAAAACGAATTAGGACAAGTCGAATTCTATTCTAAAAAAGGCCATCCGATGGTCTATGCACCGCTATCTATGGAGAAATACCCATCCACATTGAAGGATAGTGACACGGATAGATGGACACGCAAGGACTTTGAAACCGAGTACAAGGATGTCAATGCACTTAAGGCTTACGCACTACGTACCATCAAGCAGTATGCTTATCCGCTATTGACCTATACCGTTGATATTCAATCTAGCTTTATTGAAAACTACAAGGATATCAATCTAGGCGATACAGTTAAAATCGTTAACAACAACTTTAGGGGGGGATTGACCCTTGAGGCTCGTGTATCTGAAATGGTAATCAGTTTTGATATGCCGTTGAATAATTCGGTTGTATTTACCAATTTCAGGAAGCTGGACAACAAACCCTCTGGTAGTTTGCAACAACGGATTGATGAGATTGTTTCTAAATCATTGCCATACCGTGTCGAGATCACAACCACGAACGGCACAGTGTTTAAGAATGGAGTTGGTCGCTCGACTGTTCGACCAGTCTTAAAGCAAGGCGATAGAACGGTTAACGCTACATGGCGTTTTGTGATTGACGGTGCTATTAAGTATGTGGGCATGACCTATGACATGGTAGCATCACAGATTACCCAACCAACTGCCTTGACTGTTTCAGCGTGGGTAGATAATAAAGAAGTAGCTTCGGAAGAGGTTACTTTTTTAAATGTCTCGGACGGTAGAAACGGAGTTAAGGGAGATAAAGGCGACCCAGGGCCAGCAGGCCCAAAAGGTGACAGAGGATTGCAGGGCGAACGTGGTTTACAAGGTTTGCAAGGGCCAAAAGGTGACCAAGGGATCCCTGGTGTTAAGGGTGCTGACGGTAAAACACAGTACACCCACATCGCTTACGCTGATACTGTGTCTGGTAGCGGTTTTAGCCAAACTGATACCGACAAGGCCTTCATCGGTATGTACCAAGATTTCAGCACTACGGATAGTCGGAATCCACAAGACTATCGCTGGTCTAAGTGGAAGGGTAGTGATGGCCGTGACGGTATTCCGGGCAAAGCTGGAGCAGACGGACGAACAGCTTACGTCCATTTTGCCTACGCTGATAGCGCTGATGGCCGAACTGGTTTCAGTTTGACTCAAGACGGCACCAAACGATATCTGGGTATATGTACCGACTTCGATAAAGCGAATAGCACCAACCCAGCCGATTATGCATGGAATGACACTGCTGGTAGTGTGTCTGTCGGTGGTCGCAACCTCTTAAAGGGCTCGAAAGGACCTTTTAAACCGGACAAAAAACCAACGAATTTTGATAATTTCGTTCTTTACAAAAGCGAAACTTCTGTCTACTTAGAGCAAAACCAAAAGTACCTTGTCAGCGCAAAATCAGACGGTAATTTTACTGCTTTTCACAATGGAAACGCTGAGAGCGATAATGTGACACTCTGGTTAATGGACGATAAAATCCAAAATTATCAGATTGTATCTGATTTAAAAACAGGGACTACAGGAACGCAGATTACTTGGGTTAAACCAACAGGGAACTATCATCTACGTGTCAACACATATCACAAAACAGCTAGCAAGTCTGTTTGGGAAGTGAAAATCGAAAAAGGGACAGTCAAAACAGATTGGACTCCTGCGCTCGAAGATGTACAAGATGACATTAATTCTAAGGCCGACAGCGTATTGACACAAGCCCAGCTCAACAAACTCAATGAAGTTAATTCTGTGGTGCAAGCCGAGCTTGAAGCGAAAGCATCTCTTGACACACTTAATCAATGGGTCAAAGCCTACCAAGATTTTGTTAATGCGAATAACGCTAACCGGGCACAAGCTGAAAAGAATCTGGCTGATGCCAGTGCCCGTGTCGCAAAACTAGAGAACAATCTGAGCGATATGTCAGAGCGCTGGAACTTCATCGACAGCTACATGACTTCATCAAATGAAGGGCTTGTTATCGGTAAAACCGATAACTCTAGCTCTATGTTGTTCAGCCCAAATGGACGCATTTCAATGTTCTCGGCTGGTAATGAGGTCATGTACATTTCACAAGGTGTGATCCACATCGAAAATGGTATCTTCTCAAAAACCATCCAGATTGGTCGCTATCGAGAAGAGCAGGATTTCATCAATCCTGACAGGAATGTCATTAGATACGTGGGAGGTAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f43cf102379424029fc6196642498958cd0f7d0edbff1b3467a5ac26d91b2b47
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7695
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Streptococcus salivarius ureolytic strain 57.I Geng,J., Huang,S.-C., Li,S., Hu,S. and Chen,Y.-Y.M. 2011-10 — GenBank