Protein

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Genbank accession
APD22021.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MGIDQYLKVIKEGVFGRDVRQAIHDGIEQVYEDATFDGNANMEVAKARGEHNNLSERLKNMVAQIQSLSDSAPKGVYKNIEALNTAFPKGRDGIYLTQNDGKWNFWDGSKWVSGGNYQSPAQPDLEYNDIDYSAISDIELWAQIHEMYANGYDIEKGTGYPIFSKTNGEIGSIITGSGTQNYWTKRTIVVEQGEVYSARIQQAANSAYYVYFLDEGGSVIARAVKNKGVATKPERYYFSVPKGSKKMLILSFESGSVVWKGLSKNKLTTFTKTALPGKFENGTSKLGQFRTLDRRVSTKTIQYCKTETLIRVNKSGYLFFIDTFNENEEYLKSLTENVEIIIPAGTYYRLTIQTVDDREQKADVSTMYYSITCYQKSDNDFNVLNSLAHARFNSNFKFQSKLYGIRKSDISRRYPAETLIDLGIEGLQSFAIDIGNNIGYAFGWYNNASKAIKFDLSTKRELERINKPDSGHDNDAVFVNGNVYIASADKRSDDVASLLYKWNIEENTVTKINVSGVIGKPENGSRRIISGVCSAENNPENLYIVTTDHDYNLPFDGMHKEDDYLSIYYYSPQNNTGYLLWRSKWDELYVQGATAVNDIMYIACNHQHTSTEGYKGIVIKVIDLVARMQVDEIEFIGDFEPESINHVYENGNLYLLLGIAKYNSFSKVVKIKID
Physico‐chemical
properties
protein length:674 AA
molecular weight: 76256,49320 Da
isoelectric point:5,67989
aromaticity:0,11869
hydropathy:-0,47404

Domains

Domains [InterPro]
Coil
Unmapped
44–71
Coil DC_1997 SSF63825
SSF63825
STR
422–655
SSF63825
APD22021.1
1 674
Architecture
STR
STR
STR 157-284 | STR 415-655 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APD22021.1
1 674
Domain Start End Length (AA) Confidence
N-terminal 1 387 387 0,6117
Central domain 388 586 200 0,7065
C-terminal 587 674 87 0,7394
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-387
Central
388-586
C-terminal
587-674

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage IPP16
[NCBI] 		1916156 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pneumoniae
[NCBI] 		1313 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APD22021.1 [NCBI]
Genbank nucleotide accession
KY065457.1 [NCBI]
CDS location
range 30699 -> 32723
strand +
CDS
ATGGGAATTGACCAATATTTAAAAGTTATCAAGGAAGGAGTTTTTGGTCGCGATGTTCGACAAGCTATTCATGACGGTATAGAACAGGTCTATGAAGATGCAACATTTGATGGCAACGCGAATATGGAAGTGGCTAAAGCGAGAGGAGAACATAATAATCTTTCAGAAAGATTAAAAAATATGGTCGCTCAAATTCAATCTTTGTCTGACAGTGCTCCAAAAGGTGTTTACAAAAATATTGAAGCGTTAAACACTGCTTTTCCAAAAGGAAGAGATGGAATATACCTAACTCAAAACGACGGCAAGTGGAATTTTTGGGATGGCTCTAAGTGGGTCTCTGGCGGAAATTATCAAAGTCCAGCTCAGCCTGATCTCGAATACAATGACATAGACTATTCAGCTATTAGTGATATTGAACTATGGGCGCAAATCCATGAAATGTATGCAAATGGCTATGATATCGAAAAAGGAACTGGCTATCCGATTTTTTCAAAAACAAATGGAGAAATTGGCTCGATCATTACTGGTTCAGGTACACAGAATTACTGGACGAAAAGGACGATTGTTGTTGAACAAGGAGAGGTTTACTCAGCCAGAATCCAACAAGCTGCCAATTCTGCTTATTATGTCTATTTTTTGGATGAAGGTGGCTCGGTCATTGCTCGTGCAGTTAAAAACAAGGGTGTAGCAACAAAACCAGAGAGATACTATTTCAGTGTTCCAAAAGGAAGCAAAAAAATGCTTATTCTCTCATTCGAATCTGGTTCTGTTGTTTGGAAAGGATTATCGAAGAATAAACTTACAACATTCACAAAAACTGCATTACCAGGAAAATTTGAAAACGGTACATCAAAATTAGGGCAATTCAGGACATTGGATCGACGCGTTTCGACAAAAACAATTCAATATTGTAAAACAGAGACATTGATTCGTGTGAATAAAAGTGGCTATTTGTTCTTTATAGACACTTTTAACGAGAATGAGGAATATCTGAAATCACTAACAGAAAATGTTGAGATTATTATTCCGGCGGGAACCTACTACAGATTAACGATTCAGACTGTTGACGATAGGGAGCAGAAGGCTGATGTATCAACTATGTATTATTCGATTACATGTTATCAGAAATCTGACAATGATTTCAATGTTCTGAATTCGCTTGCGCATGCTCGTTTCAATTCGAATTTTAAATTTCAATCGAAACTTTATGGAATTCGAAAATCTGATATTAGCAGAAGATACCCCGCAGAAACTTTAATTGATCTTGGAATCGAAGGTCTACAGTCATTTGCTATTGACATTGGCAATAACATTGGTTACGCGTTTGGTTGGTATAACAATGCTTCGAAAGCAATCAAATTTGATTTATCAACGAAACGAGAACTAGAGCGAATTAACAAACCAGATTCAGGTCATGATAATGATGCGGTTTTTGTGAACGGGAATGTTTATATTGCTTCTGCAGATAAACGTTCAGACGATGTTGCAAGCTTATTGTATAAATGGAATATTGAAGAAAACACCGTAACAAAAATTAATGTTTCGGGAGTAATTGGTAAGCCGGAGAATGGCTCAAGAAGAATTATCTCAGGAGTTTGCTCAGCAGAGAACAATCCAGAAAATCTATATATTGTGACTACAGACCACGATTACAATCTTCCGTTTGACGGAATGCACAAAGAGGATGATTATCTATCGATATACTACTATTCGCCTCAAAATAATACAGGATATCTTTTGTGGAGATCTAAATGGGACGAATTGTATGTTCAAGGTGCAACAGCAGTAAATGATATCATGTATATTGCTTGTAATCATCAGCATACGTCAACTGAAGGCTACAAAGGAATTGTGATTAAGGTCATTGATTTAGTTGCACGTATGCAGGTTGATGAAATTGAATTTATTGGTGACTTTGAGCCTGAAAGCATCAACCATGTATACGAAAATGGGAATCTATATTTGCTTTTAGGTATCGCTAAGTACAACTCTTTTTCAAAAGTTGTAAAAATAAAAATAGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
866933f05fe01b16615873040135edf4c4bd5775075b249f6423093df25f7599
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6860
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50