Protein

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Genbank accession
YP_009224769.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MPNIMKPTGINAIWSENGQKVDPGAVKVGLGWVTELPPYQTANFIEYKQDLFNAHVNQHGIPEWDSVTEYQGNLSYTQGANGIIYKCLRTHSDKIPTDPLNITAGYWRVAFEDAGEAAKVQANLDRHVTNYNTLSGIGNVVIARQNLSVYSKAEGDARYAMRHGNGSNVFSVAPATQPTHAIPLSQLSTLVPPATETVAGVMAVATTIETEAGANDTKAVSPLKAAQVYLKRKDNLSNLSNVTAARANLGLSDTATMPSSTFLKAASNLADVPNKALARSNLGITSSATQPETYFLRSAQNLADVPNKAQARVNLGLTGMATTDPAAVMMKADNLAGLSNTATARSNLGLGTASTRNTGDFLSSGANLSDLTNVQAARNNLGLKGAATLDVWGLPANTTAMDFQSSQSDISRGWARLPNGLLLQWGTGPGLSDDTRTNIQLPVPARILNVQVTVMGTFNNSIGPGAFMTDMWTNTGFRVSCNWGNWSYPFNWFAITSTL
Physico‐chemical
properties
protein length:499 AA
molecular weight: 53142,01910 Da
isoelectric point:7,74314
aromaticity:0,07214
hydropathy:-0,20882

Domains

Domains [InterPro]
DC_0043
STR
1–330
DC_0043 G3DSA:2.60.40.3940
DC_0362
RBD
321–499
DC_0362
IPR054075
RBD
416–495
IPR054075
YP_009224769.1
1 499
Architecture
STR
RBD
STR 1-330 | RBD 331-499
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaoP5
[NCBI] 		1716042 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009224769.1 [NCBI]
Genbank nucleotide accession
NC_029083.1 [NCBI]
CDS location
range 45941 -> 47440
strand +
CDS
ATGCCAAACATTATGAAGCCTACGGGTATTAACGCTATCTGGTCTGAAAACGGCCAGAAGGTTGACCCGGGTGCTGTAAAAGTTGGGCTTGGATGGGTGACAGAACTACCTCCCTACCAAACTGCCAACTTCATTGAATACAAGCAGGACTTGTTCAACGCACACGTTAACCAGCATGGTATCCCCGAATGGGATAGCGTGACAGAGTATCAGGGCAATCTGAGCTACACTCAGGGCGCTAACGGCATTATCTACAAGTGCCTTAGAACCCATTCCGACAAGATTCCAACCGACCCTCTCAACATCACAGCAGGATACTGGCGGGTGGCGTTCGAGGATGCAGGGGAGGCGGCCAAGGTTCAAGCTAACCTTGATCGGCACGTGACAAACTACAACACCCTCTCTGGGATTGGTAACGTAGTCATTGCAAGACAGAACCTGAGTGTGTATAGTAAGGCCGAAGGCGATGCACGTTATGCCATGCGACACGGCAACGGGTCTAACGTCTTCAGCGTCGCTCCCGCGACACAGCCAACTCACGCGATCCCGCTGAGCCAGCTATCGACTCTCGTTCCTCCTGCGACTGAGACTGTAGCCGGAGTTATGGCAGTTGCTACGACTATCGAGACAGAGGCCGGAGCCAACGATACCAAGGCTGTCAGTCCTCTGAAGGCTGCTCAAGTGTATCTGAAGCGAAAGGATAACCTGTCCAACCTTAGCAACGTCACAGCAGCTAGAGCCAACCTAGGTCTCTCTGATACGGCCACGATGCCATCCAGCACGTTCTTGAAGGCAGCCAGCAACCTAGCGGACGTTCCTAACAAGGCGCTGGCAAGATCGAATCTCGGAATTACAAGTAGTGCGACCCAGCCGGAAACCTATTTCTTGAGGAGTGCTCAGAACCTAGCAGATGTACCTAACAAGGCACAAGCTAGAGTCAACCTAGGTCTCACTGGGATGGCTACAACAGACCCTGCGGCGGTTATGATGAAGGCAGATAACCTTGCCGGACTGTCTAACACTGCTACCGCTCGGTCCAACCTAGGGCTAGGCACAGCTTCTACTAGAAATACAGGAGATTTCCTGTCGTCTGGGGCTAACCTGTCCGACCTCACGAACGTCCAAGCAGCTAGAAACAACCTAGGGTTGAAGGGAGCGGCTACGCTCGATGTATGGGGTCTTCCTGCGAATACAACTGCCATGGACTTCCAGTCTAGCCAATCGGATATTTCCAGAGGCTGGGCTAGACTGCCAAACGGCCTTCTGCTACAATGGGGAACTGGTCCCGGGCTGTCTGACGACACAAGGACGAATATTCAACTCCCTGTTCCTGCTCGTATCCTGAACGTGCAAGTTACCGTAATGGGGACGTTTAACAACTCCATCGGCCCGGGCGCTTTCATGACGGATATGTGGACCAACACAGGGTTTAGAGTTAGCTGTAACTGGGGCAACTGGTCTTACCCGTTCAACTGGTTTGCTATCACTTCCACCCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e85fa4a35b7c43974387925449d9231a655dca1cd35b682ed9c72cb85a11a1a6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7631
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic identification of Pseudomonas aeruginosa phage PaoP5 Lu,S., Shen,M., Le,S., Li,G., Tan,Y., Zhao,X., Wang,J., Shen,W., Guo,K., Yang,Y., Zhu,H., Li,S., Li,M., Zhu,J., Rao,X. and Hu,F. 2016-09-23 — GenBank