Protein

View in Explore
Genbank accession
QIG64884.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLESSFNINTELIMTPSQLRKTYMWGVQVKDNNGKELPDDVYEFFIKTAQQELEDLLNLKLKRQIIKETRDYVWDDYKTYGFIRCSYPVCRAFYLKGMFGEAEQIVYPPAWLSTKKSNEIPNMYYRNLYLIPNVGGYQNGNASGVTFNGIFGANLLWRSRQYIPNYWHVRYLTGFSEVPSDLLNVIGMAAAINLFHIAGDLILGAGIASFSLGVDSLSQSISSTSSATNAGYGARVIGYQDQIKNTLPTLISKYGGFTCSVL
Physico‐chemical
properties
protein length:263 AA
molecular weight: 29658,51450 Da
isoelectric point:8,27241
aromaticity:0,13308
hydropathy:-0,13954

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacteroides phage SJC03
[NCBI] 		2710505 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacteroides thetaiotaomicron
[NCBI] 		818 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG64884.1 [NCBI]
Genbank nucleotide accession
MT074146.1 [NCBI]
CDS location
range 109227 -> 110018
strand +
CDS
ATGAAATTAGAAAGCTCTTTTAATATTAATACAGAATTAATAATGACTCCTTCGCAATTAAGAAAAACTTATATGTGGGGTGTTCAAGTAAAAGATAATAATGGTAAAGAATTACCAGATGATGTATATGAATTTTTTATAAAAACAGCTCAACAAGAATTAGAGGATTTATTAAATCTCAAATTAAAGAGACAGATAATTAAAGAAACTAGAGATTATGTTTGGGATGATTATAAAACTTATGGATTTATAAGATGTAGTTATCCTGTATGTAGAGCTTTTTATTTAAAAGGAATGTTTGGAGAAGCTGAACAAATTGTATATCCTCCTGCTTGGTTATCAACTAAAAAATCTAATGAAATTCCAAATATGTATTATAGGAATTTATATTTAATTCCTAATGTAGGAGGTTATCAAAATGGTAATGCTAGTGGAGTAACATTTAATGGTATATTTGGAGCTAATTTATTATGGAGGTCTAGACAATATATTCCAAATTATTGGCATGTTAGATATTTAACAGGATTTTCAGAAGTTCCTTCAGATTTATTAAATGTTATTGGAATGGCTGCTGCTATAAATTTATTTCATATAGCAGGTGATTTAATTCTTGGTGCAGGTATTGCTAGTTTTTCTTTAGGTGTAGATAGTTTGTCACAAAGTATATCTTCAACATCTTCTGCTACAAATGCTGGTTATGGTGCTAGAGTTATTGGGTATCAAGATCAAATAAAAAATACTTTACCTACTCTTATATCAAAATATGGAGGTTTTACTTGCAGTGTATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ee3ac88f32e4c885aaefd0797f59d4ba8fe0fc73f1906bb1ab09771a28e97d7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7630
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteroides thetaiotaomicron-infecting bacteriophage isolates inform sequence-based host range predictions Hryckowian,A.J., Merrill,B.D., Porter,N.T., Van Treuren,W., Nelson,E.J., Garlena,R.A., Russell,D.A., Martens,E.C. and Sonnenburg,J.L. 2020 — GenBank