Protein

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Genbank accession
QVW53997.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLRPFLVSGANQMTDSINANVVVSMPSQLFTMARSFKAVANGKIYIGKIDTDPVNPENQIQVYVENEDGSHIPVSQPIIINAAGYPVYNGQIAKFVTVQGHSMAVYDAHGSQQFNFPNVLKYDPDQLRQEITSTGDGKGADMIPLTQGGTIQNAVFAVTPQAYGATCDGVADDSDAVEEMMAAYPNHLIITIPPGSVLTIKRKLVYGGRRFEIRGYSGDMTNKVIGAESSQLYCDVPGDYAIQCENSDVFLSDVIVKGIPQYGNGTIGTNKGISTLNGNIKTNRTSWLGFDVPCQGINSFYVTFIDTDWLAIKNGPDIQRAYNIKFIGGRSVDFDTFFKISGAAGNGPINFIAMAFERWTNYVVGTDSAALIRPQNIAFKFCYFENMDDQSIYNGLTGRGGAATPGDAFYKKYAYARILVGTPTSFSMDETNTVYAKGLENGCIAIDSWGIRDLVFKPKIVTPADSWNSNQRPLSMVRATYLDHVDVFNNNTSPDGDLGFPFISSDNSTLLPTIRSGVGVSHGKTVLFNGFYNQTITFQDVPAGVNVYQDITTTEKLDMVNASVKITSRSAASAIATTQLQVLSSNKIRVHITNGHSNPVTFSVAIVIPYLFK
Physico‐chemical
properties
protein length:613 AA
molecular weight: 66665,45110 Da
isoelectric point:5,55706
aromaticity:0,10277
hydropathy:-0,10196

Domains

Domains [InterPro]
G3DSA:2.170.14.10:FF:000001
Unmapped
15–123
G3DSA:2.170.14.10:FF:000001 DC_2190
IPR009093
ATT
16–126
IPR009093
IPR009093
ATT
30–115
IPR009093
QVW53997.1
1 613
Architecture
ATT
STR
ATT 16-126 | STR 138-605 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVW53997.1
1 613
Domain Start End Length (AA) Confidence
N-terminal 1 173 173 0,9926
Central domain 174 513 341 0,9769
C-terminal 514 613 99 0,9669
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-173
Central
174-513
C-terminal
514-613

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage E212
[NCBI] 		2836069 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW53997.1 [NCBI]
Genbank nucleotide accession
MZ043897.1 [NCBI]
CDS location
range 31315 -> 33156
strand +
CDS
ATGCTGCGGCCATTCCTTGTATCTGGAGCAAATCAAATGACAGATTCAATAAATGCCAATGTTGTAGTGAGTATGCCTTCGCAACTCTTCACTATGGCGCGTTCTTTTAAAGCCGTAGCTAATGGCAAAATTTATATCGGTAAAATTGACACTGACCCGGTAAATCCTGAAAACCAGATTCAGGTTTATGTAGAGAACGAAGACGGTTCTCACATTCCTGTTTCGCAACCAATAATCATTAACGCTGCCGGATATCCGGTATATAACGGACAGATTGCCAAATTCGTTACCGTGCAAGGCCATTCTATGGCTGTTTATGATGCGCATGGTTCGCAGCAGTTCAATTTTCCCAATGTGCTGAAGTATGATCCTGATCAGCTTCGCCAGGAAATAACATCGACTGGAGATGGAAAGGGGGCTGACATGATACCCCTAACACAAGGAGGAACAATTCAGAATGCTGTGTTCGCAGTAACACCTCAGGCTTATGGCGCAACATGCGATGGTGTGGCTGATGACTCAGATGCTGTTGAAGAAATGATGGCAGCCTATCCAAATCATTTGATTATTACAATCCCACCTGGTTCAGTGCTTACAATTAAACGAAAGCTCGTATATGGAGGTAGGCGCTTTGAGATTCGTGGATATTCTGGCGATATGACTAATAAGGTTATAGGAGCGGAGTCAAGTCAATTATATTGTGACGTTCCTGGGGACTATGCTATTCAATGCGAAAATTCGGATGTTTTTTTATCTGATGTCATTGTAAAGGGAATTCCACAGTATGGAAACGGTACTATCGGTACGAATAAAGGAATATCGACATTAAATGGTAATATTAAAACAAACCGCACTTCTTGGCTTGGGTTTGACGTTCCATGTCAAGGTATCAATTCTTTTTACGTAACATTTATAGATACAGATTGGCTTGCAATTAAAAATGGCCCAGATATACAGCGGGCATATAACATTAAGTTTATAGGCGGAAGATCTGTTGATTTTGATACATTTTTCAAAATATCAGGCGCTGCTGGTAATGGTCCGATTAATTTTATTGCCATGGCGTTTGAACGGTGGACGAATTACGTTGTTGGTACTGATTCTGCTGCACTTATTCGACCGCAAAATATAGCGTTTAAATTTTGTTACTTTGAAAATATGGATGACCAATCTATTTATAACGGTCTTACTGGGCGGGGCGGTGCTGCAACTCCAGGTGATGCATTTTATAAAAAGTATGCTTATGCCCGCATACTGGTCGGTACGCCAACGTCTTTCAGCATGGACGAAACTAACACTGTATATGCTAAAGGGCTTGAAAACGGATGTATAGCAATTGATTCTTGGGGTATACGAGATCTTGTGTTCAAGCCTAAAATTGTTACTCCAGCAGACTCATGGAATAGTAACCAGAGGCCATTAAGCATGGTTAGGGCAACCTATCTTGACCATGTCGATGTTTTTAATAATAACACCTCACCAGATGGTGACTTAGGGTTTCCATTTATATCATCTGATAACTCTACACTGTTACCAACAATAAGATCAGGCGTTGGTGTATCCCATGGGAAAACAGTATTGTTTAATGGTTTCTACAATCAGACTATAACATTCCAAGATGTTCCAGCAGGTGTCAATGTATATCAAGATATAACAACAACAGAAAAGTTAGACATGGTAAATGCAAGTGTTAAGATAACATCAAGAAGTGCAGCTTCTGCTATTGCCACAACTCAATTGCAGGTGTTATCTTCAAATAAAATTCGCGTACACATAACAAATGGTCACAGTAACCCTGTAACATTTTCTGTGGCAATTGTAATTCCATATTTATTCAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d1a3407a809cac8426ad618a6e5fd97cc2e7d1be568ed4038d87589ebeec3554
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7633
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50