Protein

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Genbank accession
YP_010670596.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSTLKTKNIQHPSASGPAIALNPNGTFTADIEDLSAESLHGGTFSLRNKLINGSFDIWQRGTNFSGNLYTADRWKTWESGDAVATTRVFGPQGTTYGISFDRACTFQQPIELPLVGKAGEFYNGSTWVLSWYSTSSNVSDFIVEASFRDYPYDGTNTVMNTVGSISVAETVGSWTRFKVEVTIDQDPVGTSECLCVFINPQTALSLSGVQFEKGGLTALEVRPVGFELSLCQRYFELIGGARYAQIAVGKQRTTSQSYFSLTFKATKRVPPVVAWTANIITSDRYQFDQAVDALGDMEVTIDGLHARFTHTAVGAEHRPIFILSSEASPYGHMSFDAEL
Physico‐chemical
properties
protein length:339 AA
molecular weight: 37095,01760 Da
isoelectric point:5,18300
aromaticity:0,11504
hydropathy:-0,14248

Domains

Domains [InterPro]
DC_0568
STR
2–339
DC_0568
YP_010670596.1
1 339
Architecture
STR
STR 2-339
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010670596.1
1 339
Domain Start End Length (AA) Confidence
N-terminal 1 225 225 0,2012
Central domain 226 328 104 0,0004
C-terminal 329 339 10 0,9987
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-225
Central
226-328
C-terminal
329-339

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H34
[NCBI] 		2718942 Uroviricota > Caudoviricetes > Pantevenvirales > Makaravirus > Makaravirus thirtyfour
Host Synechococcus sp. MW02
[NCBI] 		1620844 Cyanobacteriota > Cyanophyceae > Synechococcales > Synechococcaceae > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010670596.1 [NCBI]
Genbank nucleotide accession
NC_070965 [NCBI]
CDS location
range 62942 -> 63961
strand -
CDS
ATGTCTACACTTAAGACCAAGAACATTCAGCACCCTTCTGCTTCGGGTCCTGCAATTGCTCTCAACCCCAACGGAACCTTTACTGCCGACATTGAGGACCTCAGTGCCGAGTCTCTGCACGGTGGTACTTTCTCTTTGAGGAACAAGCTAATCAACGGCTCATTTGACATCTGGCAAAGGGGCACTAACTTCTCGGGAAACCTTTACACTGCCGACAGGTGGAAGACCTGGGAGTCTGGTGATGCTGTGGCAACTACCCGTGTGTTTGGTCCTCAGGGCACAACATATGGTATTAGTTTTGATAGGGCCTGCACTTTCCAACAACCTATTGAACTACCACTCGTGGGGAAAGCGGGTGAGTTCTACAATGGTTCCACTTGGGTATTATCTTGGTATTCCACTTCTTCTAACGTAAGTGACTTTATTGTTGAAGCTAGTTTTAGGGATTATCCATACGACGGAACTAATACGGTTATGAATACTGTTGGTTCAATTTCTGTCGCAGAAACTGTCGGTTCTTGGACCAGGTTCAAAGTTGAAGTGACCATCGACCAAGATCCAGTTGGAACTAGCGAGTGCCTGTGTGTTTTTATCAACCCACAAACTGCACTTTCCCTCTCTGGTGTCCAGTTTGAGAAAGGCGGTCTGACCGCCCTGGAAGTACGCCCAGTGGGATTTGAATTGTCCCTCTGTCAGAGATACTTTGAACTCATTGGTGGGGCAAGATATGCACAAATTGCTGTGGGTAAGCAAAGAACTACCTCACAAAGCTATTTCAGCTTGACATTTAAAGCAACAAAGAGAGTACCACCAGTAGTTGCCTGGACCGCCAATATCATCACGTCCGATAGGTACCAATTCGATCAGGCTGTGGATGCTTTGGGGGACATGGAAGTCACAATAGATGGTCTACATGCACGCTTCACACATACCGCAGTGGGAGCGGAACATAGACCAATCTTTATTCTCTCGAGTGAAGCGTCACCCTACGGTCACATGTCTTTTGACGCTGAACTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a57b7ccdba46ae3c9265596dac17e74c0210950e4dc079b2c9bd65432a25ddaa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7957
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Isolation and Genome Sequence of a Novel Cyanophage S-H34 from the Huanghai Sea, China Jiang,T. 2019-04-04 — GenBank