Protein

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Genbank accession
XEO41140.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,66
Protein sequence
MSDLLKQHFRATNGLDAGGNKVINVALADRNVKTDGVSVEYVIQENTIQKYDPTRGYLTDFAVTYGRRIWIANKDIPKPAGDFNQANWTSLRVDPNWIYTVRKGEFEIQSGQFINVDSNAAGNATLLLPLAPDEGDTIVVRDIGGRPGYNGILIKAQDTGASIVFGESRLREVRLTRPYSQIMLTFSNGAWRASLTDFGDTAKMVVPNGIVPTQVQSGDNVVRRYTSNSEIFITLPLFANSNDIINFTDLDGTSPINHMTVRTFDPTISIGTPGQTEIQVRTSGSGFLVYDAIDKIWRVFENDLRTRVRIITSDVTLMPNEHISVFGADNSTVKTINITLPTDVAVGDTVKIAMNYMRKGQTVVIKASDGDTIASNLNLLQFPKRSEYPPDAAWVQSSSITFNGTTSYVPVLGLAYIEEKATGKSYWIVTESDPTVERVDAKDNTTRARLGVIALATQAQANAESNPEKELAITPETLNGRRSTETQTGIARIATSSEVNQATTASYLDNVIVTPKKLNERAATETRRGLAEIASNAKMDAGTDDFTIVTPKKLLYRTTSDSRLGVIQLVKTGGAPNTTNDRSSAGTGIFDHSDYKNAVTPKTLREYKATVNQSGIVWLATDSEVRNGTPASSNIPTVVTPEALHKKVATDGAIGLIQIATQTEVNAGGVTNKAVTPKTLNDRTATNDRTGIARFATPGAQGEFEAGTSSTVMVNPKLLFDKFANTGRIQVNTSSGLTITGNLWDHYTINIQEASTSQRGTTTLATAAEVRTGTDAKKIVTAATLHAKTATEGAIGLAQYATQAQVDAGTLSDRIVSPAYLKQTIQVTESWQATDSVRGTVRLSTGDGTWKGNDTNGSTLPDNGYASKGVAVSPYELNLTLKHYLPRLGKAYDTGMLGGQTPDKYARRDIAQTISGAWTFSQDTSFSNNISVQNVIYANGGEVKISPTADTGIVHVRFQNRDGSERGIIYAEPQTASAGNLKIRVKNGTGATAASQTYTFGGNGTLGVPNEVSTITLRSSGNTIVGGTVMVKDVKMLAVEGLNSIFGAQSQSAFIRSRDADTQIFAQDSTGSYPILTTKNYARLADGRYVKKAGDTMTGNLNISGSAIVITGSESWYVPTNETVIRQGSWTAEIKDATKLKGLRGYMVPIRTPIDPANPSTLVVTGYEEKTAAGGVLTQVGVTTNNTYQLWTPYPPTTETADKRFAHTVWMRIYNPNLNKFDDWMRVFTSATPPTAADIGAPSSVSTQVKTLEVLEWIKLGPVKIWPDRPNQTLKFEWVGD
Physico‐chemical
properties
protein length:1281 AA
molecular weight: 138318,29870 Da
isoelectric point:8,07694
aromaticity:0,07182
hydropathy:-0,31561

Domains

Domains [InterPro]
DC_1986
ATT
8–137
DC_1986 DC_1209
IPR048391
ATT
1127–1228
IPR048391
XEO41140.1
1 1281
Architecture
ATT
STR
ATT
STR
ATT 8-137 | STR 348-1126 | ATT 1127-1228 | STR 1229-1270 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XEO41140.1
1 1281
Domain Start End Length (AA) Confidence
N-terminal 1 840 840 0,8776
Central domain 841 1039 200 0,2038
C-terminal 1040 1281 241 0,6629
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-840
Central
841-1039
C-terminal
1040-1281

Taxonomy

  Name Taxonomy ID Lineage
Phage Raoultella phage vB_Ro_M12a
[NCBI] 		3243423 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEO41140.1 [NCBI]
Genbank nucleotide accession
PQ181262 [NCBI]
CDS location
range 3325 -> 7170
strand +
CDS
ATGAGCGATTTATTGAAACAACATTTCCGTGCAACTAACGGTTTGGATGCCGGCGGAAATAAAGTTATAAATGTGGCACTCGCTGACCGCAACGTTAAAACCGATGGCGTCTCCGTCGAGTACGTCATTCAAGAAAACACCATCCAAAAATATGATCCTACTCGTGGATATCTCACTGACTTTGCTGTGACTTATGGCCGTCGTATCTGGATTGCAAATAAAGATATTCCAAAGCCTGCTGGAGATTTTAACCAGGCGAATTGGACTTCTTTACGTGTTGACCCGAACTGGATTTATACTGTCCGTAAAGGAGAGTTTGAAATTCAATCAGGACAGTTCATCAACGTTGACTCGAACGCTGCCGGTAATGCTACGCTGTTGTTACCTTTAGCACCAGACGAAGGTGATACCATTGTAGTTCGTGATATCGGTGGACGCCCTGGATATAACGGAATTCTTATTAAAGCACAAGATACTGGTGCATCTATTGTCTTCGGCGAATCACGCTTACGTGAAGTAAGACTTACTCGTCCGTATTCACAAATTATGCTTACGTTTAGTAACGGTGCATGGCGTGCTAGTTTAACAGATTTTGGCGATACTGCTAAAATGGTAGTTCCGAACGGGATTGTTCCAACCCAGGTTCAGTCAGGTGATAACGTAGTTCGTCGTTATACTTCCAACTCAGAGATTTTTATTACTCTGCCGTTGTTCGCTAATTCAAACGATATCATCAATTTTACTGACCTTGATGGTACATCGCCGATTAACCATATGACTGTGCGTACGTTTGACCCAACTATCTCAATTGGGACTCCTGGACAAACGGAAATTCAAGTACGTACTTCAGGTAGTGGATTTTTGGTGTATGACGCTATTGACAAAATATGGCGCGTCTTTGAAAATGATTTACGTACACGTGTAAGAATAATTACTTCTGACGTTACTTTAATGCCTAATGAGCATATTTCTGTATTTGGCGCAGATAATAGTACAGTTAAAACAATTAACATTACTTTACCTACTGACGTAGCTGTTGGGGATACTGTCAAAATCGCAATGAATTATATGCGCAAAGGACAGACTGTAGTAATTAAAGCTTCTGATGGTGATACTATCGCTAGCAATTTGAATTTACTGCAATTTCCAAAACGCTCAGAGTATCCACCTGATGCAGCATGGGTTCAATCAAGCTCAATTACCTTTAACGGAACTACATCGTATGTTCCTGTTCTTGGGCTTGCATATATTGAAGAAAAAGCAACCGGAAAAAGCTATTGGATTGTAACTGAATCTGACCCTACCGTAGAACGTGTTGATGCTAAAGACAATACTACCAGAGCACGATTAGGTGTTATTGCTCTTGCTACACAGGCTCAAGCTAACGCGGAGTCAAATCCAGAAAAAGAATTAGCAATTACGCCAGAAACCTTAAACGGACGTCGTTCTACTGAAACTCAGACTGGTATAGCAAGAATTGCAACTTCCAGTGAAGTTAATCAGGCAACAACTGCTTCTTACTTGGATAATGTAATCGTTACTCCTAAAAAGCTTAACGAAAGAGCTGCTACTGAAACTCGTAGAGGTTTAGCTGAAATTGCGTCTAATGCTAAAATGGATGCAGGAACAGACGATTTTACAATTGTTACTCCTAAGAAGTTACTTTATCGTACTACATCGGATTCACGATTAGGTGTTATTCAATTAGTAAAAACTGGTGGTGCTCCTAACACAACTAACGATCGTTCTTCTGCTGGCACCGGTATATTCGATCATTCTGATTACAAAAATGCAGTTACTCCAAAAACTCTTCGTGAGTATAAAGCTACTGTAAATCAGTCAGGAATAGTTTGGTTAGCAACTGATAGCGAAGTTAGAAACGGAACTCCTGCTTCTTCAAATATTCCTACGGTTGTTACACCGGAAGCTTTGCATAAAAAAGTTGCTACTGACGGAGCAATTGGATTAATCCAAATAGCTACACAAACTGAAGTTAATGCTGGCGGCGTGACTAATAAAGCAGTTACACCTAAAACATTAAATGACCGTACAGCAACTAACGATCGTACTGGTATTGCTCGCTTCGCGACACCTGGTGCCCAGGGTGAATTTGAAGCTGGTACTTCAAGTACAGTAATGGTAAACCCTAAATTACTGTTCGATAAATTTGCTAATACTGGTCGTATCCAAGTTAATACTAGTTCTGGCTTAACTATTACTGGGAACCTCTGGGACCATTATACCATCAACATACAGGAAGCAAGTACTTCTCAAAGAGGTACAACCACTCTTGCTACTGCTGCTGAGGTTAGAACTGGAACCGACGCCAAGAAAATAGTTACTGCTGCCACGCTACATGCTAAAACAGCAACCGAAGGAGCTATCGGTCTTGCTCAGTATGCTACACAGGCACAAGTTGATGCAGGCACATTAAGTGATAGAATTGTTTCTCCTGCTTACTTGAAACAGACTATTCAGGTAACAGAGTCATGGCAAGCTACAGACAGCGTTAGAGGGACCGTGAGGCTATCTACAGGCGATGGAACGTGGAAAGGTAATGATACCAATGGCTCAACTCTTCCGGATAACGGGTATGCCTCTAAGGGCGTCGCAGTGTCTCCGTATGAATTGAACCTTACACTGAAACATTACTTGCCTCGTCTCGGTAAAGCCTATGACACAGGAATGTTAGGTGGTCAAACACCAGACAAATATGCTCGTCGCGATATAGCGCAGACTATTTCTGGAGCTTGGACATTTAGTCAGGACACTTCATTTAGCAATAATATTTCTGTCCAGAATGTTATATATGCTAATGGTGGTGAAGTTAAAATTTCTCCAACTGCTGACACTGGAATTGTGCATGTTCGTTTTCAAAATAGAGACGGAAGCGAGCGTGGTATAATTTATGCAGAACCTCAAACGGCTTCAGCTGGAAATTTAAAAATTCGTGTCAAAAATGGAACTGGAGCTACTGCTGCAAGCCAAACTTACACATTTGGTGGAAACGGCACCTTAGGCGTTCCTAATGAAGTATCAACTATAACTTTGAGGTCTTCTGGAAATACAATAGTCGGCGGAACTGTAATGGTTAAGGACGTTAAGATGCTTGCTGTCGAGGGATTGAATTCAATATTCGGTGCCCAATCACAGTCCGCATTTATTCGTTCCCGTGACGCTGATACACAAATTTTTGCACAGGATTCAACTGGATCGTATCCAATTTTAACTACCAAAAACTACGCAAGATTAGCTGATGGCCGTTATGTCAAGAAAGCTGGTGATACAATGACCGGCAATCTTAACATAAGCGGTTCTGCTATCGTTATCACAGGTTCTGAATCGTGGTATGTACCAACAAATGAAACTGTAATAAGACAAGGTTCTTGGACTGCTGAAATCAAAGACGCTACTAAATTGAAAGGTCTTCGCGGTTATATGGTTCCAATCAGAACACCGATTGACCCTGCTAATCCAAGCACATTAGTAGTGACTGGGTATGAAGAAAAAACTGCAGCTGGTGGTGTTTTAACTCAGGTTGGTGTAACTACAAACAATACTTATCAGCTTTGGACGCCTTATCCTCCAACAACCGAAACTGCTGATAAGCGTTTTGCGCATACTGTGTGGATGAGGATTTATAATCCAAACCTTAATAAGTTTGATGATTGGATGCGAGTATTTACATCTGCTACTCCTCCAACTGCAGCTGATATCGGAGCTCCGAGCTCAGTATCAACTCAGGTTAAAACCCTTGAAGTCCTGGAATGGATTAAGCTTGGCCCAGTTAAAATCTGGCCAGATCGTCCAAACCAAACTCTCAAATTTGAATGGGTAGGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4e759f8cdccec814d084b1571f5297e9be5489f4a3ab6b53ab737249780a4880
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2723
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50