Protein

View in Explore
Genbank accession
QLA10723.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,71
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADLTAIQFLRTATAGKLPTAAQLHEGALAINLADRTIYTKNAAGQIIDLGFGKGGSVNGSIDATGTVKAGKLETALADLATANITTLNVTNLNNTGLTNIANSLNIYGIFGDSNKRLTLTSVPGQTVPMNIRSEKDGSANNLVFEIGAAKLATMKLFDSPSSGYTGRFDINSYLYVDAPSQFNNTLYSRQSSVDYSIDALSPHVYSGSGDVNGLNYLLKTRAHTGSYIFHLLADGRAATLEGLALYHGDGPQHRMVTFGANYTSFANSISVGFSGVSSLGPASIALGASGTGFVLSNDAVHTMAGGASMANVSSGGVLTVLRSINTLGTGLAVNTSMIKANTDVDGNAIGDGVTHIGYKDAGGNIAHYFRGKAATNIDTHAGLIVNYDLLVKRNASISGVLNASTLTGSGSSTSYKGLTIENISAGWSYIELKALNAVAHIALKTEAADGAVANSLHLRPNGMPNGSLVIQPAGQMIHLNQYGSVSIGALNGQHAHFNTDRPQFYFYKDIVSGGNFFAEGGQKVFHQGFLPTAVQIGAVPSKGRIVYNYNSFLETGIYGVGGVGTNGPDNSMGYGSLIVATNLDVGLQILGGHNNDRLLFRGWTAYGGSWTPWCEVYHTGFKPTPNDIGAYTKAEVNSIAAGSASRPNDLGLMDLNVLYTPGIYYQGSNANTSLDRGYPVLLAGSLIVTQGAGQQQRYHVYNTNTIYTRSRYTGAWTDWVLQYNAQNKPTAADVGAISTTNGGISYGQIGGTGNSDLYTGAGIETRSSGAASPSIGFHKPGSYAGTLRMLNSTTFGFLNQDNSSYADLTVRNLTAVTQITGNGVYGSTAVGGGRLYAGYDSGIAGAISCSEWFRSSGNSGWASDTYGGGIWMQDSVWVRVYGDKKFYVSNASPDAIHTAGGVAANGSISSQSNITAVGDLSTQRNVGCTGDVYARSFYGNANIGGTGSAINCPGGIYSQGTNWLYGQIITNNNPINAGSGVITGNGSGLTGLTSGQVGLGNVPNTVHTTAANANTVVVRDGSGRVNAAGFSGNGSALTGLSWSNIVGRPADTTQWYTVHNSPGSGTQTIALPSAMVNHLVAGQMVKIRVWFNRSNSQRSERRMREMIIDGADGWAGVQWDVWIDVGWPGVSYCYVRNNVTNDVNLRNKISSQYSNITRFEYQLL
Physico‐chemical
properties
protein length:1165 AA
molecular weight: 121989,00370 Da
isoelectric point:8,01331
aromaticity:0,09013
hydropathy:-0,11785

Domains

Domains [InterPro]
DC_0468
STR
1–583
DC_0468 DC_1909
cd19958
STR
549–618
cd19958 cd19958
QLA10723.1
1 1165
Architecture
STR
STR
STR 1-618 | STR 627-780 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLA10723.1
1 1165
Domain Start End Length (AA) Confidence
N-terminal 1 902 902 0,0872
Central domain 903 1101 200 0,2763
C-terminal 1102 1165 63 0,9955
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-902
Central
903-1101
C-terminal
1102-1165

Taxonomy

  Name Taxonomy ID Lineage
Phage Shewanella phage Thanatos-2
[NCBI] 		2734809 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLA10723.1 [NCBI]
Genbank nucleotide accession
MT457553.1 [NCBI]
CDS location
range 122560 -> 126057
strand -
CDS
ATGGCAGATTTAACGGCTATTCAGTTCTTACGAACTGCAACAGCAGGAAAGTTACCCACCGCAGCTCAGTTGCATGAAGGTGCTTTGGCTATTAACTTAGCAGACAGGACAATTTATACAAAAAATGCTGCAGGCCAAATCATTGATTTAGGTTTCGGTAAAGGTGGATCAGTAAATGGAAGTATTGATGCCACAGGCACGGTAAAGGCTGGAAAATTAGAAACAGCTTTAGCTGATTTGGCTACAGCGAATATTACTACTTTAAATGTAACCAATTTAAACAATACAGGCCTTACAAACATTGCTAATAGTTTAAACATTTACGGTATATTTGGGGATAGTAATAAGAGACTGACATTGACTTCTGTCCCGGGTCAAACAGTTCCTATGAATATACGCTCAGAAAAAGATGGCTCAGCCAATAATCTTGTTTTTGAAATAGGGGCGGCTAAATTAGCAACAATGAAATTGTTCGACAGCCCTTCTTCAGGATATACAGGCAGATTCGATATTAATTCATATTTGTATGTTGATGCCCCGAGCCAATTTAATAATACACTATATTCTAGGCAATCTTCAGTAGATTATTCTATAGATGCTTTATCGCCACATGTTTATTCCGGCTCAGGAGATGTAAATGGATTAAACTATCTTCTTAAAACTAGGGCCCATACAGGTTCATACATTTTCCATCTTCTTGCTGATGGCCGAGCTGCAACATTAGAAGGACTAGCATTATACCATGGTGACGGCCCGCAACATAGAATGGTCACCTTCGGTGCAAACTATACCAGTTTTGCTAATAGTATTTCTGTAGGATTTAGCGGAGTAAGTTCATTAGGCCCGGCATCAATTGCTTTAGGTGCAAGTGGCACTGGATTTGTATTATCTAATGATGCGGTCCATACTATGGCCGGTGGCGCAAGTATGGCTAATGTTAGCTCTGGAGGGGTGTTAACTGTCCTAAGAAGTATTAATACATTAGGCACAGGATTGGCAGTAAATACTTCCATGATTAAGGCAAATACTGATGTTGATGGTAATGCTATTGGTGATGGTGTTACACATATTGGATATAAAGATGCTGGTGGTAATATTGCCCACTATTTCCGCGGCAAAGCAGCTACAAATATAGACACCCACGCAGGGTTAATAGTAAATTATGATTTATTGGTAAAACGTAATGCTAGTATTTCGGGTGTTTTAAATGCTAGTACTTTAACTGGTTCAGGAAGTTCTACTAGTTATAAAGGTTTAACAATAGAAAATATTAGTGCAGGTTGGTCATATATAGAGCTCAAAGCATTAAATGCCGTAGCTCATATTGCACTTAAAACAGAAGCAGCTGATGGTGCTGTGGCTAATAGTTTACATCTAAGACCTAACGGTATGCCGAACGGGTCTTTGGTTATTCAGCCTGCAGGCCAAATGATCCATCTGAACCAATATGGTAGTGTAAGTATTGGTGCATTAAATGGACAGCATGCACATTTTAATACAGACAGACCACAATTTTATTTCTATAAAGATATTGTAAGTGGTGGAAATTTCTTTGCCGAAGGCGGGCAAAAAGTATTTCACCAAGGATTTTTGCCAACAGCAGTACAAATAGGAGCTGTCCCTTCAAAAGGAAGAATAGTATATAATTATAATTCATTCTTAGAAACAGGTATATATGGGGTTGGGGGTGTAGGCACAAACGGTCCTGATAATTCTATGGGATATGGTTCGCTAATTGTAGCGACTAATCTGGACGTAGGATTACAAATACTTGGTGGTCATAATAACGATAGATTATTATTTAGAGGATGGACTGCTTATGGTGGCTCTTGGACCCCATGGTGTGAAGTATATCATACAGGCTTTAAACCTACACCAAATGATATTGGTGCATATACTAAAGCTGAAGTAAATTCTATAGCGGCTGGTTCTGCATCTAGGCCTAATGATTTAGGATTAATGGATTTAAATGTATTATATACCCCAGGAATATATTACCAAGGTTCTAATGCTAATACATCACTAGATAGAGGTTATCCTGTATTATTAGCCGGGTCTTTAATTGTCACACAAGGAGCAGGCCAACAACAAAGATACCATGTCTATAATACTAATACTATATACACAAGATCAAGATATACTGGTGCTTGGACTGATTGGGTGTTACAATATAATGCCCAGAATAAACCTACTGCTGCGGATGTAGGAGCTATATCTACAACTAATGGCGGCATTTCTTATGGTCAAATTGGTGGTACAGGCAATAGTGACCTATATACAGGAGCAGGTATTGAGACCCGTAGCTCAGGTGCTGCTTCGCCATCTATTGGATTCCATAAACCTGGATCTTATGCTGGCACTTTAAGGATGCTTAACTCTACTACATTTGGATTCTTGAACCAAGATAACAGTTCATATGCTGATCTAACTGTTAGAAATTTGACTGCAGTAACACAAATAACAGGTAATGGAGTGTACGGCTCCACTGCTGTTGGAGGTGGTCGTTTGTATGCTGGCTATGACTCTGGTATTGCAGGTGCTATATCATGCTCCGAATGGTTTAGAAGTTCAGGTAATAGTGGTTGGGCTAGTGATACCTATGGTGGTGGTATCTGGATGCAAGATAGTGTCTGGGTCAGGGTGTACGGTGACAAGAAATTCTATGTTTCTAATGCAAGCCCAGACGCAATCCATACTGCAGGCGGAGTTGCAGCAAATGGGTCTATATCCTCACAATCTAATATAACAGCCGTTGGAGATCTTTCTACCCAACGCAACGTAGGTTGTACTGGTGATGTGTACGCCAGAAGTTTCTATGGTAATGCTAATATAGGTGGTACTGGTAGTGCTATCAATTGCCCGGGCGGTATTTATAGCCAAGGTACTAATTGGTTATATGGTCAGATTATCACTAATAATAACCCTATTAATGCTGGTTCTGGTGTTATTACAGGTAATGGATCTGGGCTGACTGGCTTAACTTCCGGCCAAGTTGGTTTGGGTAATGTTCCTAACACAGTGCATACAACAGCGGCTAACGCTAATACTGTTGTTGTTCGTGATGGTTCTGGGCGGGTTAACGCTGCTGGGTTCAGTGGTAATGGTTCTGCGCTGACTGGCTTATCATGGAGCAATATCGTTGGTCGTCCGGCAGATACAACCCAATGGTATACTGTGCATAATAGTCCTGGTTCAGGAACTCAAACTATTGCTTTACCATCTGCAATGGTTAACCATTTAGTTGCAGGTCAAATGGTTAAAATTCGTGTTTGGTTTAACCGCAGTAACTCACAACGTTCTGAACGTAGAATGCGTGAAATGATTATTGATGGTGCAGACGGTTGGGCTGGTGTACAATGGGATGTATGGATCGATGTAGGTTGGCCTGGCGTATCGTACTGTTATGTTAGAAACAATGTGACTAATGACGTTAATTTACGAAACAAAATCAGTTCACAGTATAGCAACATCACACGGTTCGAGTATCAACTGCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6bbf1ade6a969021c7ba7264876b241034cef65834b5cf77588199fa31a6c0a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5011
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of phage Thanatos infecting and lysing Shewanella oneidensis and promoting nascent biofilm formation Kreienbaum,M., Doerrich,A.K., Brandt,D., Leonhard,T., Hager,F., Brenzinger,S., Hahn,J., Ruwe,M., Briegel,A., Kalinowski,J. and Thormann,K.M. 2020-09-18 — GenBank