Protein

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Genbank accession
QYC50589.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSFFAGKFSDGKTVLSLNAANGGDTGEHYSPNTNSIFHSDMPFVLVDGTYEAALGNAGNGYFVTQMPWDIINIKSNDPGRVILTAIEINGTHRGFLNGTQSQVGQFLSFFEDQPRAGAELSVTSAFAIGDSLAHGTYIYNGSLGHEESIARQGTGGTLLQSSGFQIFRPGGVSAGEAISRAWGLMGFPTGVSTVPIDGGNADYWEPNWQAPVGSAGRGHDWFYVCSSNIRGFAGKKGVLPDNVNVLYQSPAYPEKIYVCRGSTSNMAAQSARKVYVQDWYNVTPTKVIWYVLNLRYSNGSMGVSGNPFTGSDILISPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYVGNNAAYTGVFGDNTARCEFIGSSNGGLWSPVNYGGAASQISLYKFGVGKQWYVDTNTNSIGNEHGPVWSPSTVPLRLFPGNVASTYVGDDITPSYPGAGDFYTPLATVWLGLPNAHSTVILTTEVIMGNLNTAGMPVRTYGGSAWQVQGRRQQSYTAGDGVFHQILTLPPGYLVPYHSTTSYSYTQTWASRPDEMAFRRNGYIYTVKNLGNGNVELGVIIHAAEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:593 AA
molecular weight: 63876,48740 Da
isoelectric point:6,41618
aromaticity:0,12310
hydropathy:-0,18061

Domains

Domains [InterPro]
IPR059609
RBD
1–593
IPR059609
QYC50589.1
1 593
Architecture
RBD
RBD 1-593
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYC50589.1
1 593
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,6432
Central domain 11 242 233 0,8685
C-terminal 243 593 350 0,6800
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-242
C-terminal
243-593

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage JNwz02
[NCBI] 		2861003 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYC50589.1 [NCBI]
Genbank nucleotide accession
MZ570151 [NCBI]
CDS location
range 87940 -> 89721
strand -
CDS
ATGAGTTTTTTCGCAGGAAAATTTAGTGATGGTAAAACTGTATTATCGCTAAACGCTGCTAATGGTGGTGATACTGGTGAACACTACTCTCCAAATACTAATAGTATCTTTCACTCAGATATGCCTTTCGTCCTGGTTGATGGGACTTATGAAGCGGCTCTAGGTAATGCAGGTAATGGATACTTTGTTACTCAGATGCCTTGGGATATTATAAACATTAAATCCAATGATCCTGGTAGAGTTATATTAACTGCTATTGAGATAAATGGTACTCATAGGGGTTTCCTTAATGGTACACAATCTCAGGTTGGCCAGTTCTTATCATTCTTTGAAGACCAACCACGTGCTGGTGCTGAATTATCTGTAACATCTGCTTTTGCGATCGGTGATAGTTTAGCTCATGGTACTTATATTTATAATGGTAGCCTGGGTCATGAGGAATCTATTGCTAGGCAAGGAACTGGTGGTACTTTACTACAATCTTCCGGTTTCCAGATCTTTAGACCTGGTGGTGTTTCTGCAGGTGAAGCTATTTCCAGAGCCTGGGGATTAATGGGCTTTCCAACGGGCGTATCTACAGTTCCTATAGATGGTGGTAACGCCGATTATTGGGAACCTAACTGGCAAGCGCCTGTTGGTTCTGCTGGTAGAGGCCATGATTGGTTTTACGTTTGTAGTTCCAATATTCGTGGCTTTGCAGGTAAGAAAGGCGTACTACCAGATAACGTAAACGTTCTTTACCAATCTCCTGCATATCCAGAAAAAATATATGTTTGTAGAGGTTCTACTTCTAATATGGCTGCTCAGTCCGCTAGAAAGGTATATGTACAGGACTGGTATAACGTTACGCCAACTAAGGTTATTTGGTATGTGCTAAATCTGCGCTATTCTAATGGTAGTATGGGAGTTTCTGGTAATCCATTTACCGGTTCAGATATCCTAATATCTCCATCTAACTTTACTATTAAAGGTGTTAGTTTACCAAATACAGGCTATAAATTTATTAACCAGAATGCCTTTGGAAACTTAGGCTATCGCCCTGATATGGAGTATGTTGGTAATAACGCTGCGTATACCGGAGTTTTTGGTGATAATACTGCACGATGTGAATTTATCGGCTCTAGTAATGGGGGTTTGTGGTCTCCTGTTAACTATGGGGGTGCTGCTTCTCAAATTAGCCTTTATAAATTTGGGGTGGGTAAACAATGGTACGTAGATACTAATACCAATTCAATTGGTAATGAACATGGCCCTGTGTGGAGTCCTAGTACTGTACCTCTCAGGCTATTCCCAGGCAACGTTGCAAGTACTTACGTAGGGGACGATATAACTCCATCCTACCCTGGTGCTGGTGACTTCTACACACCTTTGGCTACAGTTTGGTTGGGATTACCAAATGCTCACTCTACTGTTATATTAACCACTGAAGTTATTATGGGTAACCTTAATACTGCTGGTATGCCTGTACGTACTTATGGGGGTAGTGCTTGGCAGGTACAAGGTAGACGTCAACAAAGTTATACAGCTGGTGATGGTGTATTTCATCAGATTCTTACTCTGCCACCTGGCTATCTAGTACCATATCACAGTACAACTTCATATAGCTATACCCAAACGTGGGCTAGTAGACCTGATGAGATGGCTTTTCGTAGAAATGGGTATATTTATACAGTAAAAAACCTTGGTAATGGTAACGTTGAGTTAGGCGTTATTATCCATGCTGCCGAAGCAGCTGCTATCTTCTTACCAAGACTACGTGTAACAGTTCAACGCCTAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef351a18f12f592c9efecd82b493aa41f63fc0ac553d233799a3d751535f8850
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2714
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50