Protein

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Genbank accession
AEG42291.1 [GenBank]
Protein name
putative phage-related tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MKTKLPNIESNTGRFIDGNPATGTLGTIVTAKWLNEVQERIQDYFEEFKNVLLLANMQPIAGRSNQVADAIKFYIGSLNASPTQKGLVQLANNLTTNDATKALTAAQGKILKDEIDGIEIGGRNLIKNSRLLNDTTHWNVIGGRDVRNGIAVLKSLDTSRQWCWRQTFDLPEKQYTFSAEVKPERTAFYLHLYNGKSWVNFHARNLTPGIWQKISITFVSAITNISFINPGEGLIELQNPMLVEGNRAMTWAPAPEDLTEEALNSARQNYVAKAGDTMTGPLNINHASSYLRGKNNGVDDWFVGRVRNNDNDVALASYQYNTGIHLKSDRVESNKPIYRGNHLVFDEGNLLPVRQIDLRSIANGQISFQDATPAQLPLGAFVGLSKKSHLNGAGDGWMMINKGWPDNSGVFACNRIGISGDRIRFQTANNLNAWGNIIELANLSDFIYQKIGNFEIRKYPDGMMIQTYFYDVNDLKEWGEKQFTWAVAFADKPMVIPKVEHTYGINSDVGSAIMRKSTNAVCYYKLYEHNSENQGDCRVQFLGVGRWK
Physico‐chemical
properties
protein length:548 AA
molecular weight: 61388,62830 Da
isoelectric point:8,41495
aromaticity:0,09854
hydropathy:-0,40420

Domains

Domains [InterPro]
DC_2057
STR
15–285
DC_2057 IPR048388 IPR022246
IPR054500
STR
92–116
IPR054500 G3DSA:6.20.80.10
IPR048388
ATT
281–369
IPR048388
AEG42291.1
1 548
Architecture
STR
ATT
RBD
STR 15-280 | ATT 281-369 | RBD 371-486 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Haemophilus phage SuMu
[NCBI] 		483266 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host [Haemophilus] parasuis
[NCBI] 		738 Bacteria > Proteobacteria > Gammaproteobacteria > Pasteurellales > Pasteurellaceae > Haemophilus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEG42291.1 [NCBI]
Genbank nucleotide accession
JF832915 [NCBI]
CDS location
range 32528 -> 34174
strand +
CDS
ATGAAAACAAAACTTCCAAATATTGAATCCAATACAGGTAGATTTATTGATGGTAATCCTGCAACAGGAACATTAGGGACTATTGTAACAGCTAAATGGCTTAATGAAGTCCAAGAGCGTATTCAAGACTATTTTGAAGAATTTAAGAACGTATTACTTTTGGCAAATATGCAACCTATTGCAGGAAGAAGTAATCAAGTTGCAGACGCTATTAAGTTTTATATTGGAAGTCTCAATGCCAGCCCAACCCAAAAGGGCTTGGTGCAACTCGCCAATAACTTAACCACCAATGATGCTACAAAGGCGTTGACGGCAGCACAGGGAAAAATCTTAAAAGATGAGATTGATGGGATTGAGATTGGGGGGCGGAATTTAATTAAAAATTCTCGTCTATTAAACGACACTACCCACTGGAATGTAATTGGTGGAAGGGATGTTAGAAATGGAATCGCAGTTTTAAAAAGTTTAGATACATCGAGACAATGGTGCTGGAGACAAACTTTTGATTTGCCTGAGAAGCAATATACATTTAGTGCTGAGGTCAAACCCGAAAGAACTGCGTTTTATCTCCATCTGTACAATGGGAAGAGCTGGGTTAATTTTCATGCAAGAAATTTGACTCCAGGCATATGGCAAAAAATATCGATTACCTTCGTCAGTGCGATAACAAACATTTCATTCATTAATCCAGGTGAAGGACTTATAGAATTACAAAATCCTATGCTTGTCGAAGGCAATAGAGCTATGACTTGGGCTCCAGCGCCCGAAGATTTAACCGAAGAAGCGCTTAATAGTGCCCGTCAAAACTATGTTGCCAAAGCTGGGGACACAATGACTGGTCCATTGAATATTAACCACGCGAGTTCGTATCTCAGAGGAAAGAACAACGGCGTTGATGACTGGTTTGTTGGACGAGTCAGAAATAATGATAACGATGTTGCACTGGCATCCTACCAGTATAACACAGGTATACACCTCAAGTCCGACAGAGTTGAATCGAACAAACCTATCTATCGAGGCAATCACCTCGTGTTTGACGAAGGAAATTTGCTTCCCGTTCGACAGATTGATTTGCGTTCTATTGCTAATGGGCAAATATCTTTCCAAGATGCTACGCCTGCGCAGTTACCGCTTGGAGCTTTCGTGGGGCTATCTAAAAAATCTCACTTGAATGGTGCGGGCGATGGCTGGATGATGATTAACAAAGGCTGGCCAGATAACTCAGGAGTATTTGCTTGCAATCGTATTGGTATTTCGGGCGATAGAATACGCTTCCAAACTGCAAATAATCTTAATGCTTGGGGGAATATCATTGAGCTGGCCAATCTCAGTGATTTTATCTATCAAAAAATCGGCAATTTTGAAATTCGCAAATACCCTGATGGGATGATGATTCAAACCTATTTTTATGATGTAAATGATTTGAAAGAATGGGGAGAAAAGCAATTTACTTGGGCTGTCGCTTTTGCTGATAAACCTATGGTGATACCTAAAGTGGAGCATACCTATGGTATAAACAGCGATGTTGGTAGTGCTATTATGAGAAAAAGCACCAATGCTGTTTGTTATTATAAATTATATGAACACAACAGTGAGAATCAAGGTGACTGTCGAGTGCAATTTTTAGGTGTTGGTCGCTGGAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b2a660f4fd7cdaee0998d68aed0da260f877fe71f8a5d6c6da0da08ceb2100df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7718
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Detection of a bacteriophage gene encoding a Mu-like portal protein in Haemophilus parasuis reference strains and field isolates by nested polymerase chain reaction Zehr,E.S. and Tabatabai,L.B. 2011 21908286 GenBank
Genomic and proteomic characterization of SuMu, a Mu-like bacteriophage infecting Haemophilus parasuis Zehr,E.S., Tabatabai,L.B. and Bayles,D.O. 2012 22823751 GenBank