Protein

View in Explore
Genbank accession
UPW39102.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MIDYNGLKTIFGEKLPESHIFFATVAAHKYVPSYAFLRRELGLSSAHTNRKVWKKFVEAYGKAVPPAPPAPPLTLSKDLTASMSVEEGTALTLSVTATGGTGPYTYAWTKDGSPIPDASGATYTKPAAATEDSGAYKVTVTDSKQVSKDSTTCAVTVNPTVPGG
Physico‐chemical
properties
protein length:164 AA
molecular weight: 17261,29750 Da
isoelectric point:8,57470
aromaticity:0,09146
hydropathy:-0,21707

Domains

Domains [InterPro]
IPR048804
ATT
2–60
IPR048804 IPR007110
DC_0400
STR
2–162
DC_0400
IPR013783
STR
79–158
IPR013783
IPR036179
RBD
79–157
IPR036179
PF13927
STR
82–141
PF13927
UPW39102.1
1 164
Architecture
ATT
STR
ATT 2-60 | STR 61-164
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_ESCO40
[NCBI] 		2918880 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus ESCO40
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW39102.1 [NCBI]
Genbank nucleotide accession
OM386660.1 [NCBI]
CDS location
range 91693 -> 92187
strand -
CDS
ATGATTGATTATAATGGTCTAAAGACCATTTTTGGTGAAAAACTGCCAGAATCTCATATCTTCTTTGCTACGGTTGCTGCGCATAAATATGTTCCTAGCTATGCTTTTCTGCGTAGAGAACTAGGACTTTCATCTGCGCATACTAACCGTAAAGTATGGAAGAAATTTGTAGAGGCTTATGGTAAAGCAGTTCCTCCTGCTCCACCGGCCCCACCGTTAACTCTTTCTAAAGATTTAACTGCTAGCATGTCCGTTGAAGAGGGAACAGCATTAACACTTTCTGTTACTGCAACTGGTGGTACTGGTCCATATACTTATGCATGGACTAAAGATGGTTCTCCTATTCCGGATGCTTCAGGAGCTACCTATACTAAGCCTGCAGCAGCTACGGAGGATTCTGGAGCCTATAAAGTAACTGTAACAGATAGTAAGCAAGTAAGCAAGGACTCTACTACATGTGCTGTGACAGTTAATCCTACTGTTCCTGGAGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0dea226601a44ea6b2c92ad6a427a7cf0787ea24e6ab277cea9ebb90ccf2f1f9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7242
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank