Protein

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Genbank accession
QEM42470.1 [GenBank]
Protein name
long tail fiber, proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,52
Protein sequence
MSDLIKQHFRATNGLDAGGNKVINVAKADRNVMDDGVNVEYLIQENTIQPWANDRGYPEGFAVTMEKRIWVARADIAAPIPPAVNTFKQGEWISMRVDPKWEQYSSGTTELLPGTYANIDTRVNPVTLVLPKNKVEQGDTIVIRDIGGKPGINQALIKVQDSAPAMIFQGSILRELQLTRPYSMLLLTFTSAGWYVTLSDLSSLARTIDSTTLDAATDVGAQVQSSEYIVRYYTSNKKLTVRLPRYANHGDMITFAEPEGKTPLYHFTIKTYDANSSIGTEGTTSWTSKIKGGGVLIYDGPRKVWRINSIDMQQRIKIVTDDVVMQPNEAITIFGANNSTVKTISVTLPTQVAPGDTVRIGMNYMRKGQTVNIVTPPAPANGTKDRIASTVGLLQFPKRSEYPPDAAWTQVDSLSFNGTSDYPPVLELAYVEATPNNYWIVSENIPSVERVDWTNDTTRARVGVIALATQANLEANSSNLVDGVAVTPHTLSKRTATEARTGIAAIALSTDVLQNSNYAFINDKIITPKRLNERTATETRRGLAEIATQAETDAGTDDTTIVSPKKLNARKATATLDGIIQLVNIGGTPATVNREDAGQGIYDHNDFSKAVTPKTLRGYKATEIASGCVWLAKDSEVRNPPAINSNIPLVVTPQSLHKKVADTGNIGFIQIATQAEVNAGTDNTKAVTPKTFNDRIASETLTGIARFATQKEFDENTGGGMMVSTSKISTFFNRPERVAVRTEAGLTQQGTLWGQLVLNIQTPTETQRGTPKIATQTLVNAGTDDVDYLTSKKLQAKKGTESAYGIVKYATQADTNTGTANDVAVSPVHLKYVIQTSADWRAQDNVRGTVRVANGDTAWTGNSTTGSDDKPKEVNGYAVSPNGLKQALANYLPLNAKADNSGLLNGLTSDQFIRRDIDQTVNGKLTLTKSTDFNSDVNVKGLGNFTGGEVKVFATSSTANSHVRFLNSDGNERGIIYARPVAAGNSQQLTLRVKGSAPDTGKEFSFGNNGEFVAPDKITSNGTIHSASDVNSNTVYRVKNASVIQLQDSDSVASFGNLAKKGRILTNDASQTQVTDNSGNYVILTTKNKDTILDTRYVKKGGDTMTGSLTINNASVVVNGSENWYKNDTSADTEKYMQPGSWTVEIKNASKLASLRGYMVPVREENPLIPGSMIVTGYEEKTAGGGLLAQFSVSSGYTYQTWTPYPKAGENSEKNYAHTMWTRVYNPLKGKFDEWMRVFTSATPPTAADIGAPSSVSTSVKTLEVQEWIKIGPVKIYPDRTSQTVKFEWVGD
Physico‐chemical
properties
protein length:1292 AA
molecular weight: 140162,36450 Da
isoelectric point:7,98617
aromaticity:0,07198
hydropathy:-0,39396

Domains

Domains [InterPro]
DC_1986
ATT
6–130
DC_1986 DC_1209
IPR048391
ATT
1140–1239
IPR048391
QEM42470.1
1 1292
Architecture
ATT
STR
ATT
STR
ATT 6-130 | STR 356-1139 | ATT 1140-1239 | STR 1240-1285 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QEM42470.1
1 1292
Domain Start End Length (AA) Confidence
N-terminal 1 853 853 0,8084
Central domain 854 1053 201 0,2756
C-terminal 1054 1292 238 0,6528
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-853
Central
854-1053
C-terminal
1054-1292

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage EI
[NCBI] 		2601625 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QEM42470.1 [NCBI]
Genbank nucleotide accession
MN106245 [NCBI]
CDS location
range 150251 -> 154129
strand +
CDS
ATGAGCGACTTAATCAAACAGCATTTTAGAGCAACCAACGGGCTTGATGCTGGTGGAAACAAAGTAATCAACGTCGCTAAAGCCGATCGTAATGTGATGGACGATGGGGTCAACGTTGAGTATCTTATCCAAGAAAATACCATCCAGCCTTGGGCCAATGATCGTGGGTATCCTGAAGGCTTTGCGGTTACCATGGAAAAACGTATCTGGGTAGCACGTGCAGATATTGCGGCTCCTATCCCGCCCGCAGTAAACACCTTTAAACAAGGTGAGTGGATTTCCATGCGTGTTGACCCGAAGTGGGAACAGTATAGTTCAGGGACCACAGAACTTTTACCAGGGACCTATGCAAACATCGATACTCGTGTTAACCCGGTTACACTGGTTCTTCCTAAAAATAAAGTAGAACAAGGTGATACGATTGTTATCCGGGATATCGGTGGTAAACCAGGTATCAACCAGGCATTAATTAAAGTACAAGACTCTGCGCCAGCAATGATCTTCCAAGGAAGTATCCTTCGTGAACTGCAGCTGACTCGTCCTTATAGTATGCTTCTGCTGACGTTTACATCGGCCGGGTGGTACGTAACTCTTTCAGATCTAAGTTCTTTGGCTCGTACCATTGATTCTACCACACTGGATGCTGCTACCGATGTTGGCGCTCAAGTACAGAGTTCTGAGTACATTGTACGTTATTATACTTCTAATAAAAAATTAACAGTTCGTCTTCCTCGTTATGCTAACCATGGTGATATGATTACCTTTGCTGAACCGGAAGGCAAAACACCATTATACCATTTTACCATTAAGACTTATGATGCAAATAGTTCTATTGGAACTGAAGGGACTACATCCTGGACATCTAAGATTAAAGGCGGCGGTGTTCTGATTTATGATGGTCCACGTAAGGTATGGCGCATCAACTCTATTGACATGCAGCAACGTATCAAAATCGTTACTGACGATGTAGTGATGCAACCTAACGAAGCTATTACCATATTCGGTGCTAACAACTCAACAGTAAAAACTATTTCTGTTACTTTGCCTACTCAAGTTGCTCCAGGTGATACTGTTAGAATCGGTATGAACTACATGCGCAAAGGGCAAACAGTCAACATCGTTACTCCTCCTGCTCCGGCTAATGGGACCAAAGATAGGATTGCATCCACAGTTGGCTTACTCCAGTTCCCTAAACGCTCTGAGTATCCGCCTGATGCCGCGTGGACTCAAGTTGATAGTTTATCATTCAATGGAACTTCGGACTATCCTCCAGTCCTAGAGTTGGCCTATGTAGAAGCTACACCTAATAATTATTGGATCGTTTCGGAGAACATTCCTAGTGTAGAACGTGTTGATTGGACCAATGATACCACAAGAGCCCGTGTAGGCGTTATTGCGTTGGCTACCCAAGCTAATTTAGAGGCAAATAGTTCTAATTTGGTCGATGGTGTTGCTGTTACTCCGCATACCTTAAGTAAAAGAACAGCTACAGAAGCTCGTACTGGTATTGCTGCTATTGCATTAAGCACAGATGTTTTACAAAATAGTAACTATGCTTTTATTAACGATAAGATTATTACTCCTAAACGTCTTAATGAAAGAACTGCTACAGAAACGCGTAGAGGATTAGCTGAAATAGCTACCCAAGCCGAAACAGATGCTGGTACTGATGATACAACTATCGTAAGTCCTAAAAAGCTTAATGCTCGTAAAGCTACTGCTACACTTGATGGCATCATTCAACTGGTTAATATAGGCGGAACTCCTGCTACAGTAAATAGAGAAGATGCCGGTCAAGGAATTTATGACCATAATGACTTTTCAAAAGCTGTAACTCCTAAAACTCTTCGTGGGTATAAAGCTACTGAAATTGCTTCTGGTTGTGTATGGTTAGCTAAAGATAGTGAAGTCCGAAATCCACCGGCTATAAATTCTAATATCCCGTTAGTTGTTACACCGCAATCTCTTCACAAGAAAGTTGCAGACACGGGCAATATAGGATTTATCCAAATTGCCACTCAAGCAGAAGTTAACGCGGGTACAGATAACACTAAAGCAGTTACTCCTAAAACGTTTAACGATCGTATTGCTTCTGAAACTTTGACTGGTATTGCACGTTTTGCTACTCAAAAAGAATTTGATGAAAATACCGGCGGCGGTATGATGGTATCAACTTCTAAGATTTCTACATTCTTTAATAGACCTGAACGAGTAGCGGTAAGAACAGAAGCTGGGTTAACCCAACAAGGAACTTTATGGGGACAGTTGGTTCTTAATATCCAGACTCCAACAGAAACTCAACGCGGTACGCCTAAGATTGCAACTCAGACGCTTGTCAATGCAGGAACTGATGATGTTGATTATCTGACATCTAAAAAGCTTCAAGCTAAAAAGGGTACCGAATCAGCTTACGGTATTGTTAAATATGCCACTCAGGCTGATACCAATACTGGCACTGCTAATGATGTGGCTGTTTCTCCGGTTCACTTGAAGTACGTTATTCAGACTTCTGCTGATTGGCGCGCTCAGGATAACGTTCGCGGCACGGTCCGTGTAGCTAACGGCGATACTGCTTGGACTGGTAATAGTACTACTGGCTCTGATGATAAACCTAAAGAAGTTAATGGTTACGCAGTTTCACCTAACGGTTTAAAGCAAGCCTTAGCTAATTATCTTCCTTTGAATGCTAAAGCTGATAACTCTGGTTTATTAAATGGCCTTACTTCAGACCAATTTATTAGACGTGACATAGATCAAACCGTTAATGGTAAATTGACTCTTACCAAATCTACAGACTTTAATTCAGACGTCAATGTTAAGGGCCTTGGTAATTTTACCGGTGGCGAGGTTAAGGTATTTGCTACTTCGTCTACAGCCAATTCTCACGTCAGATTTTTAAACTCAGATGGAAATGAACGTGGAATAATTTACGCTAGACCGGTAGCTGCAGGAAATTCTCAGCAGCTTACACTACGTGTTAAAGGTTCAGCCCCTGATACAGGTAAAGAATTTTCTTTTGGTAATAATGGTGAGTTTGTTGCACCTGATAAAATAACCTCTAACGGGACAATTCATTCTGCTTCAGATGTTAACTCAAACACCGTATACCGTGTTAAAAATGCTTCAGTAATCCAACTCCAGGATTCTGATAGTGTAGCATCTTTTGGTAATCTTGCTAAGAAAGGAAGAATCTTAACAAACGATGCTAGCCAAACACAAGTTACCGACAACTCCGGAAATTATGTCATTTTAACCACTAAAAATAAGGATACCATTTTAGATACCAGGTATGTTAAAAAAGGTGGCGATACCATGACGGGCTCGTTAACAATAAACAACGCATCTGTTGTTGTTAACGGTTCTGAAAATTGGTATAAAAATGATACCTCTGCTGATACAGAAAAATATATGCAGCCGGGTTCTTGGACAGTAGAAATTAAAAATGCTTCTAAGCTAGCTTCGCTTCGTGGTTATATGGTGCCTGTCAGAGAAGAAAATCCTTTAATCCCAGGCTCTATGATTGTAACCGGCTACGAAGAAAAAACAGCAGGTGGTGGTTTACTTGCCCAATTTAGCGTTTCTTCTGGATACACCTATCAGACTTGGACCCCTTATCCTAAAGCTGGCGAAAATTCAGAGAAAAACTACGCCCATACAATGTGGACTAGAGTTTATAATCCACTTAAAGGCAAGTTTGATGAATGGATGCGTGTATTTACTAGCGCCACTCCTCCTACAGCTGCAGATATAGGTGCTCCGAGTTCAGTAAGTACTTCTGTTAAAACCTTGGAAGTTCAAGAATGGATTAAGATTGGCCCTGTCAAGATTTATCCTGATCGTACTTCTCAGACCGTTAAGTTTGAATGGGTAGGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bb9cedca1a1d712162e01690bfa639c74cf194c2b7bae2dec4f7fab9e400594e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5522
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Klebsiella pneumoniae Myophage EI Michalik,J., Lessor,L., Liu,M. and Gill,J. 2019-09-26 — GenBank