Protein

View in Explore
Genbank accession
UJH95883.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MRYTYVVDVGDGVRKDFPFSFAGQDTGYLSVSNIAVFIAGVQASNYTIRPSAPNTVTFSTAPAVGAEVLIRRIMPKLVPYTDFSRGNPFSQDSLNDTNLQMLYLIQEIYDGYLPEGFFFRVDIDMRGHKLINLGDGVNDGDSVNMGQFSEEVVRNDAQDGRLTALEDNITAGEQANFFAQLYVATGGETTITTTNSLFCAALYIQGLYQHKIAGAWGQTGGTITFAEPLKAGWQVYLILGTELPSDSIYATIESVAALNATVDSINSQYAKKGANSDITSLSGLTTPLSTGQGGNGNNVGRSASSTKLDVPRGLRVSLTNTNAVNFDGTQDVSNIGVNGVLPLANGGLGSNTAAGARSTIGAAASGDNVDITSIKGNTSGVAAAAGVVGEVLSKTTQVSITGGVETSIVSLTLTPGCWRVKGLAEYTTTVGSISAAQLSVNTVATTGASFPRRNILIAPFGSPINIIAPDYTINVSVATTIYLIGFINYPSGTATSNGYIEALRIR
Physico‐chemical
properties
protein length:506 AA
molecular weight: 52961,60750 Da
isoelectric point:4,82196
aromaticity:0,08103
hydropathy:0,06304

Domains

Domains [InterPro]
IPR005604
ATT
3–111
IPR005604 DC_1547
UJH95883.1
1 506
Architecture
ATT
STR
ATT 3-111 | STR 125-506
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage Nufs112
[NCBI] 		2894290 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJH95883.1 [NCBI]
Genbank nucleotide accession
OK570185.1 [NCBI]
CDS location
range 36797 -> 38317
strand +
CDS
TTGAGATATACATATGTTGTAGATGTGGGTGATGGGGTCAGGAAGGACTTCCCATTCTCCTTTGCTGGTCAAGATACGGGATACCTTTCGGTATCTAACATTGCCGTGTTTATCGCTGGGGTGCAGGCCAGTAACTACACAATCAGGCCAAGTGCCCCTAATACTGTGACATTCTCCACTGCTCCAGCTGTTGGGGCAGAGGTGCTTATCCGGCGTATCATGCCTAAACTGGTCCCGTACACAGACTTCTCTCGTGGCAACCCCTTCAGCCAGGATTCCCTAAACGACACGAACCTCCAGATGCTCTATCTGATTCAGGAGATTTATGACGGCTATCTGCCAGAGGGCTTCTTCTTCCGTGTTGATATTGATATGAGGGGCCACAAGCTTATCAACCTCGGTGATGGGGTTAATGATGGGGACTCAGTTAATATGGGGCAGTTTAGTGAAGAGGTTGTAAGGAACGATGCGCAGGATGGTAGGCTTACTGCCCTTGAGGATAATATAACGGCTGGCGAGCAGGCAAACTTCTTTGCACAGCTTTATGTAGCTACGGGTGGTGAGACTACTATCACTACTACAAATAGCCTGTTCTGTGCTGCACTCTACATACAAGGTCTTTACCAACACAAGATTGCAGGTGCATGGGGCCAGACTGGCGGAACTATCACCTTTGCAGAACCGCTGAAAGCTGGTTGGCAGGTATACTTAATCCTAGGAACTGAACTTCCATCTGACTCAATCTATGCAACAATAGAGTCTGTCGCGGCCCTTAATGCTACGGTTGATAGCATTAACAGCCAGTATGCTAAGAAGGGTGCTAATAGCGACATAACCAGCCTATCAGGGTTAACCACACCTTTGTCAACTGGTCAGGGCGGTAACGGCAACAATGTAGGGCGCTCAGCAAGCTCTACTAAACTTGACGTACCAAGGGGATTAAGGGTAAGTCTTACCAATACCAACGCTGTTAACTTTGATGGGACGCAGGATGTGTCTAATATTGGAGTTAATGGAGTCCTACCTCTTGCTAATGGTGGTCTGGGTTCCAATACGGCAGCAGGTGCAAGGTCAACGATAGGTGCAGCAGCATCTGGTGATAACGTGGACATCACATCTATCAAGGGTAACACTAGCGGAGTCGCAGCAGCAGCTGGTGTTGTTGGGGAGGTGCTGTCAAAAACAACTCAGGTATCCATCACTGGTGGTGTGGAGACAAGCATTGTCAGCCTAACACTGACACCGGGTTGTTGGAGGGTTAAGGGGCTTGCTGAATACACCACAACTGTTGGTAGCATCTCGGCAGCACAGCTATCTGTTAACACTGTGGCAACCACAGGTGCCTCCTTCCCACGACGTAATATACTTATTGCCCCATTTGGGAGTCCAATTAATATAATCGCACCTGATTACACGATTAATGTCAGTGTTGCTACCACAATTTACCTCATCGGCTTCATCAACTACCCATCAGGCACAGCAACTTCAAATGGGTATATTGAAGCCCTTAGGATTAGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
646a7d208c7dd25bfd306e3d0b5537186ca27ddcab730cf53cabbd3eff26593a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage Nufs112 Dislers,A., Zrelovs,N. and Kazaks,A. 2012-10-15 — GenBank