Protein

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Genbank accession
YP_010669724.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPFKNFLWDEAWELNVSRDKVRGAFHVIKFGTNNDVDGSLETIWDAGGLYTYLTTAATVTVTSTDADDSASGTGARTVTVEGLDANYNLVSETLTVGGGAGTVEFYRVFRAYVASAGSSGSNEGTISISSGGTTLAQIRAVGSPTLRGLGQTFMCLYTVPAGYTGYIFDWNVSTAKADGDVFLLKRLVNDGAWRTQDSMHTNINSIERSYKFPLKIEEKADIEVRALSPTNNMKCASTFCILLVQNNDT
Physico‐chemical
properties
protein length:249 AA
molecular weight: 26870,65250 Da
isoelectric point:4,87283
aromaticity:0,10040
hydropathy:-0,12129

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SCSM1
[NCBI] 		2588487 Uroviricota > Caudoviricetes > Pantevenvirales > Zhoulongquanvirus > Zhoulongquanvirus esscess
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010669724.1 [NCBI]
Genbank nucleotide accession
NC_070962.1 [NCBI]
CDS location
range 44538 -> 45287
strand +
CDS
ATGCCTTTCAAGAATTTTTTATGGGATGAAGCATGGGAACTGAATGTTTCCCGTGATAAAGTCCGTGGTGCATTTCATGTTATCAAGTTTGGAACAAATAATGATGTTGACGGTTCATTAGAAACTATTTGGGATGCTGGTGGTCTTTATACATATCTGACCACTGCAGCAACAGTCACTGTAACTAGTACAGATGCCGACGACTCTGCTTCTGGAACTGGTGCAAGAACTGTAACCGTAGAAGGACTTGATGCAAACTATAATCTAGTTTCAGAAACACTAACTGTTGGTGGAGGTGCAGGAACTGTTGAGTTCTATAGAGTGTTCCGTGCTTATGTTGCATCAGCTGGTTCTAGTGGTAGTAATGAAGGAACTATCTCAATTTCTTCTGGAGGAACAACTCTTGCACAAATTCGTGCTGTAGGTTCTCCAACTCTCAGAGGATTGGGTCAAACGTTTATGTGTCTATATACAGTGCCAGCAGGATACACTGGATATATCTTTGACTGGAATGTTTCAACTGCAAAAGCAGATGGTGATGTGTTCTTATTGAAGAGACTTGTCAATGATGGTGCATGGAGAACACAGGATTCTATGCATACAAACATTAATTCTATTGAGAGATCTTATAAGTTTCCACTAAAAATTGAAGAGAAAGCAGATATTGAAGTTAGAGCATTATCTCCAACAAACAATATGAAGTGTGCATCAACCTTCTGTATTCTGTTGGTACAAAACAACGATACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
45d3984bb721b2809096151c29c368e208fd65740795d847dc3b8c31dc438522
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7087
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and proteomic characterization of cyanophage S-SCSM1 provides new insights into understanding the viral gene diversity and phage-host interactions Wang,Q., Xu,Y., Jiao,N. and Zhang,R. 2022-10-26 — GenBank