Protein

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Genbank accession
AKQ75864.1 [GenBank]
Protein name
ribonuclease III
RBP type
TF
Evidence RBPdetect2
Probability 0,61
Protein sequence
MTTPNFAITELAASQAQKYVTVNEAFRVVDTAMNLTVIRADNTAPPGSPSEGDKYIPFATATGAWVGQEGNIACYINAEWIFFTPAEGWRAYNQTTNTLMIWNGAAWIDFSASILASASNGSAAAPTYSFASDTDTGMYRNAANELGFSAGGAEKFKVTTSQLISSTADVLFNNAGSNSQITVNKNAAGDNSIVNFQTGFSHHASVGLQGNNDFTIKVGTGFDIAQVIQNDLSATDFYTPEVNVNEANGGALRLRVIEEELTGLSGATVTTTAAFPNQSIILGVSLRVTTTITGATNFDCGDGTTAGRFGGSLGLAAGTTNQGTIGPSGNYGTTNVVLTANGSNFTAGAVRVCLIYLELIAPTS
Physico‐chemical
properties
protein length:364 AA
molecular weight: 37799,28360 Da
isoelectric point:4,45256
aromaticity:0,09066
hydropathy:0,01566

Domains

Domains [InterPro]
DC_0438
STR
1–364
DC_0438
IPR021251
STR
22–107
IPR021251
AKQ75864.1
1 364
Architecture
STR
STR 1-364
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage RDJL Phi 2
[NCBI] 		1682380 No lineage information
Host Roseobacter denitrificans
[NCBI] 		2434 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKQ75864.1 [NCBI]
Genbank nucleotide accession
KT266805 [NCBI]
CDS location
range 61903 -> 62997
strand +
CDS
ATGACGACCCCAAATTTCGCCATCACGGAGCTTGCAGCTTCCCAGGCCCAAAAATATGTGACGGTCAATGAGGCCTTCCGCGTGGTTGATACCGCGATGAACCTCACCGTGATCCGCGCCGACAACACTGCACCTCCGGGGTCTCCTTCGGAGGGCGACAAGTATATCCCTTTTGCAACCGCCACCGGAGCCTGGGTGGGGCAAGAGGGAAACATCGCCTGCTATATCAATGCTGAATGGATTTTCTTCACGCCAGCTGAAGGCTGGAGGGCCTACAACCAAACGACCAACACTTTGATGATCTGGAACGGAGCGGCGTGGATTGACTTCAGCGCTTCAATCCTGGCGTCAGCTAGTAACGGTTCGGCTGCTGCTCCCACTTATTCGTTCGCATCAGACACCGACACGGGCATGTATCGGAACGCTGCCAACGAACTCGGCTTTTCTGCAGGAGGAGCTGAGAAATTCAAGGTGACGACCAGCCAGCTCATTTCGTCCACTGCAGACGTCTTGTTCAATAACGCTGGAAGCAACAGCCAGATCACCGTGAACAAAAACGCCGCGGGAGACAATAGCATCGTCAATTTCCAGACGGGCTTTTCGCATCATGCTTCGGTTGGCTTGCAGGGCAACAATGACTTCACGATCAAAGTGGGAACTGGCTTCGATATAGCCCAGGTGATCCAGAACGATCTTTCGGCGACCGACTTCTACACGCCTGAGGTGAACGTCAACGAGGCGAATGGGGGTGCTCTACGGCTGCGTGTGATCGAGGAGGAGCTGACCGGTTTGTCTGGTGCGACCGTGACAACGACAGCTGCCTTCCCAAATCAGAGCATCATCCTGGGAGTGTCGCTTCGGGTGACCACGACGATCACAGGAGCCACCAACTTCGACTGTGGAGATGGGACAACTGCTGGCCGTTTCGGAGGCTCTCTGGGTCTCGCAGCTGGAACCACAAACCAAGGAACGATTGGACCGTCCGGCAACTATGGCACAACCAACGTTGTGCTCACTGCCAACGGATCAAACTTTACGGCTGGCGCGGTTCGTGTCTGCCTGATCTACCTGGAGCTGATTGCTCCGACGAGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f228cdf521900d16eb08222088516ec998a264d0c1c275afd71a66552ad8d94f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8480
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Roseophage RDJL phage 2, a siphovirus infects Roseobacter denitrificans OCh114 Liang,Y., Zhang,Y., Zhou,C., Chen,Z. and Yang,S. 2016-02 — GenBank