Protein

View in Explore
Genbank accession
XES71998.1 [GenBank]
Protein name
tail spike
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAYSWQESVKPAGTQDIQCDIEYLDKSYIHVYLDGAETTAFSWTSSTNIRLNSPLSAETAVLLIRKTAREYLYIEFASGAPFIEGNVDTQNTQFLHLAQELVEGRSIEGFYGDINMHRYRITNLGDPVDARDAANKQYVDAGDARLDQRIDAEHAARVAAVANEAAIRKAADDALDVRTTNLEQTYFNANTNSFSWWTVLTADTDTVTPGMPFTKAKVRINGITQTAGYSYTVNAGVVKFAEVLPAGTLVDMTIGIDTEADTSAVSTVLTLLSAESGAGYIGGLNYVTPEMSGLLTGVGNADDDTAAIQWALNQNAARVVLDSTKTYNVHPGVIQHTGKVNVDAGTAKIVCDGIAIDIIDGAGSVWKGGNLLSKTIPWTVVYDEDFNIVESGTLGYGRMPHQDDANVDPSHYYQQICCALVFRSSTSGVLDGLTVSGVEGSYAAVVAAGFKNTKWVNNKIRGGALAGAIMVLNDCEFPVTVGFGWNSGNDVSYANPFKWSRGSNHSFVNCDLFESRQMGLFVTGSDYVTISNVNTYDNAESGVQTGQYSSAYPQESIICKHVIQIGCKSWGNYYDGLDHASVTSGAAGPYFDKYLNVSNCEVFNNRATGIFAQGSNLQINGNNFHDNGTHGIRIQDSSVVDVSRNQCAYNGKLAGGYQILAVGSDMSVDDNTVLNTSQTNSHLVNISIGSQAVLKFGVKFRNTPLSTRSSPKTVIGVGVLMSGTEKTSDGSEASYSGLRTASYIPAPIAGDTRTQSVASEAGAVAAWKHPATGAWMRLFTNDLTGATNTGFSFGYNWGKSTANPSGYWDNAGIGGTLFSVNPTSFSFDIHPAGSMTSAGGFNISATVIRPNVDNAMSCGQSSFRFTQLFAVNSTIGTSNARDKTDPLNPSDTEIDAFYEILYLPWVWQWLAKVQVEGDDARLHSGPTVQAAIAIMDKHGLDWTRYGAFCYDEWEAWEGGIDPVTMKYVPPHDAGYSYGFRKEELLMWLLRALAEKTKSIEARLSALETANSK
Physico‐chemical
properties
protein length:1012 AA
molecular weight: 109108,89740 Da
isoelectric point:4,92620
aromaticity:0,09980
hydropathy:-0,19229

Domains

Domains [InterPro]
DC_1609
STR
1–390
DC_1609 IPR011050 IPR036388
IPR005604
ATT
12–102
IPR005604 IPR012334 IPR036388
IPR011050
STR
302–574
IPR011050 IPR006626 IPR006626 IPR006626 cd10144
IPR039448
ENZ
502–673
IPR039448 IPR030392 Coil
IPR006626
Unmapped
525–547
IPR006626 DC_0504 IPR030392
XES71998.1
1 1012
Architecture
STR
ATT
STR
RBD
STR 1-11 | ATT 12-102 | STR 103-722 | RBD 855-1010 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XES71998.1
1 1012
Domain Start End Length (AA) Confidence
N-terminal 1 299 299 0,9928
Central domain 300 727 429 0,9901
C-terminal 728 1012 284 0,9343
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-299
Central
300-727
C-terminal
728-1012

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaP_Indie
[NCBI] 		3243736 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XES71998.1 [NCBI]
Genbank nucleotide accession
PQ049254.1 [NCBI]
CDS location
range 10058 -> 13096
strand +
CDS
ATGGCATACAGCTGGCAAGAGTCGGTAAAGCCTGCAGGTACTCAGGATATCCAGTGCGATATTGAGTATCTGGATAAGTCCTATATTCACGTTTACTTAGATGGTGCTGAGACTACTGCCTTCTCTTGGACCAGCTCCACCAATATTCGTCTGAACTCTCCGCTGTCTGCAGAGACAGCGGTGCTCCTCATTCGTAAGACTGCACGAGAGTATCTCTACATTGAGTTTGCTAGTGGTGCCCCGTTCATTGAAGGTAACGTAGATACCCAGAACACTCAGTTCCTGCACCTAGCCCAAGAGCTGGTGGAAGGGCGTTCTATCGAGGGATTCTACGGTGACATTAACATGCACCGTTACCGCATCACGAACCTGGGCGACCCGGTTGATGCGCGGGATGCTGCGAACAAGCAGTATGTCGATGCCGGGGATGCCCGGCTAGACCAACGCATTGATGCGGAGCATGCTGCCCGGGTAGCCGCGGTAGCCAATGAGGCCGCTATTCGTAAAGCTGCTGATGACGCACTGGATGTGCGCACCACGAACCTGGAGCAGACGTACTTCAACGCTAACACGAACAGTTTCTCTTGGTGGACCGTTCTGACAGCAGACACAGACACTGTAACGCCGGGTATGCCTTTCACTAAGGCTAAGGTACGTATCAACGGGATTACGCAGACCGCAGGATACTCCTATACCGTTAACGCCGGTGTAGTAAAGTTCGCCGAGGTACTCCCTGCAGGCACCCTGGTTGATATGACCATTGGGATTGACACCGAAGCGGATACATCCGCCGTGTCAACTGTGTTAACACTGCTATCAGCGGAGAGTGGTGCAGGTTATATCGGAGGCCTTAACTACGTTACACCTGAAATGTCAGGGCTATTAACGGGTGTTGGCAATGCTGACGATGATACGGCAGCTATCCAGTGGGCACTGAACCAGAACGCAGCACGGGTTGTCCTCGACTCAACGAAAACCTACAACGTCCATCCGGGGGTTATTCAACACACCGGGAAAGTCAATGTTGACGCCGGGACAGCTAAAATAGTATGTGATGGCATAGCTATCGATATTATTGACGGTGCCGGTTCAGTGTGGAAAGGCGGTAACTTACTCAGCAAAACAATCCCCTGGACAGTTGTGTATGACGAAGATTTCAACATAGTTGAAAGCGGGACTCTAGGTTATGGTCGCATGCCGCACCAGGATGACGCAAACGTAGACCCATCTCACTACTACCAGCAAATTTGTTGTGCACTGGTGTTTCGGTCTTCTACCTCTGGCGTTCTTGACGGATTAACTGTATCTGGTGTGGAGGGCAGCTATGCCGCAGTTGTAGCTGCTGGCTTCAAGAATACCAAGTGGGTGAATAACAAGATTCGAGGTGGTGCACTCGCTGGGGCAATCATGGTACTCAATGATTGTGAATTCCCTGTGACTGTGGGTTTTGGGTGGAACTCAGGTAACGACGTATCCTACGCTAACCCATTTAAATGGTCGCGTGGAAGCAATCATTCCTTCGTAAACTGCGACCTCTTTGAAAGCCGACAGATGGGCCTTTTCGTCACTGGTTCAGATTACGTGACGATTTCTAACGTCAATACGTACGATAACGCAGAGTCTGGGGTGCAGACAGGGCAATACAGTTCCGCGTACCCACAAGAAAGCATCATCTGTAAGCATGTCATTCAGATAGGGTGTAAATCCTGGGGGAACTATTATGATGGTCTTGACCATGCCTCAGTAACGAGCGGTGCTGCTGGTCCATACTTTGATAAATACCTTAATGTCTCTAACTGCGAGGTCTTCAATAACCGCGCTACCGGCATATTTGCCCAGGGTAGTAACCTTCAAATTAATGGCAATAATTTCCACGACAACGGTACTCACGGGATACGAATCCAGGACTCATCCGTGGTTGATGTTTCACGGAACCAATGCGCCTATAACGGGAAGCTGGCTGGTGGCTATCAAATACTGGCCGTAGGTTCAGATATGTCTGTGGATGATAACACAGTCTTGAATACTTCCCAGACCAATTCCCACTTAGTAAACATTAGTATTGGGTCACAGGCCGTACTAAAATTTGGTGTTAAGTTCCGTAATACACCACTGAGTACGAGATCATCTCCGAAAACTGTCATCGGTGTGGGCGTACTGATGTCCGGCACAGAGAAAACATCTGATGGCAGCGAAGCATCGTATTCTGGGTTAAGGACGGCAAGCTACATTCCGGCCCCTATAGCAGGCGATACGCGCACACAGAGCGTAGCTTCTGAGGCCGGGGCAGTTGCAGCGTGGAAACACCCAGCTACTGGTGCCTGGATGCGGTTGTTTACCAACGACCTGACTGGTGCAACTAATACCGGGTTTTCTTTTGGTTATAACTGGGGGAAAAGTACAGCTAACCCATCCGGCTATTGGGACAACGCCGGTATAGGTGGCACGTTATTCAGTGTTAACCCAACGTCGTTTAGCTTTGATATACACCCCGCCGGGTCTATGACCAGTGCCGGAGGATTCAATATCTCCGCTACCGTTATTCGCCCTAACGTGGACAATGCCATGTCCTGCGGACAGTCGTCCTTTAGGTTTACCCAGCTGTTTGCTGTTAACAGCACTATTGGTACGTCTAATGCAAGGGACAAGACGGACCCGCTTAACCCGTCAGATACTGAGATCGATGCTTTCTATGAAATCTTGTATCTGCCTTGGGTGTGGCAGTGGTTGGCCAAGGTACAGGTCGAAGGGGATGATGCGCGTTTACATTCTGGACCAACAGTACAGGCAGCCATCGCTATAATGGATAAGCATGGACTTGATTGGACTCGCTATGGGGCCTTCTGTTACGACGAGTGGGAAGCCTGGGAAGGTGGTATTGACCCAGTAACTATGAAGTATGTTCCTCCTCATGATGCTGGTTACAGCTATGGATTTAGAAAGGAAGAACTACTTATGTGGCTGCTTCGCGCTTTGGCGGAGAAGACTAAATCCATTGAAGCACGGTTGTCAGCGTTGGAAACGGCAAACAGTAAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
da2bc2d6bb4c322c5e94e361a82b69810fbbaeeaeee2b6b1952d39c72eb8a14d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6761
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage-Antibiotic Synergy: vB_AbaP_Indie Resensitizes Multidrug-Resistant Acinetobacter baumannii to Antimicrobials Orozco-Ochoa,A.K., Gonzalez-Gomez,J.P., Quinones,B., Castro-del Campo,N., Valdez-Torres,J.B. and Chaidez-Quiroz,C. 2025-04-04 — GenBank