Protein

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Genbank accession
YP_010742228.1 [GenBank]
Protein name
HNH endonuclease
RBP type
TSP
Evidence DepoScope
Probability 0,58
Protein sequence
MNTAFDAIDFSVAMTNQLFSYDSKTGVIRLKSTGCKIGNLNTADGGTRIECNGKTLSGARVAWIIATGNTIPPGFAVVCRQRTPGHYGNRISNLYLVDVARDPNFYA
Physico‐chemical
properties
protein length:107 AA
molecular weight: 11548,98660 Da
isoelectric point:9,21597
aromaticity:0,09346
hydropathy:-0,09813

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010742228.1
1 107
Domain Start End Length (AA) Confidence
N-terminal 1 82 82 0,1050
Central domain 83 96 15 0,0073
C-terminal 97 107 10 0,9978
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-82
Central
83-96
C-terminal
97-107

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage BF9
[NCBI] 		2835936 Uroviricota > Caudoviricetes > Dhillonvirus >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010742228.1 [NCBI]
Genbank nucleotide accession
NC_073083 [NCBI]
CDS location
range 41137 -> 41460
strand +
CDS
ATGAATACTGCATTCGACGCCATCGACTTTTCAGTGGCAATGACCAATCAGCTTTTTTCCTACGACAGTAAAACGGGCGTTATCCGCCTTAAGTCAACCGGCTGCAAGATTGGCAACCTCAATACTGCCGATGGCGGTACTCGTATCGAATGCAACGGCAAGACGCTGTCTGGCGCACGCGTGGCGTGGATTATCGCGACCGGCAATACAATTCCACCAGGCTTCGCCGTTGTGTGCCGTCAGCGCACGCCAGGCCATTACGGCAACCGGATCAGCAATCTTTATTTGGTGGACGTTGCACGCGACCCGAACTTTTATGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
756b40c629947494c54eba4c367a32eac71853fe9195df408f27656aec4645f8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7232
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50