Protein

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Genbank accession
UYE98654.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,79
Protein sequence
MTISFNNGSSGSCNCSGINNLVINNAGHLIVTYDDNTIQDLGQVVGANGTNGTNFYPNEVGFVIPDSTFDLDKDIGWSYLSLTINSTQTVPTIYFKTNAANSPTATWVSAPFGQGAKGDTGEPFHIDSQGTTKPTTGLFDNYTFLDTDDGTIWIYDLDTLTWAGPYQFRGAQGLQGRFIIDSQGDTFPVITDLNPGYTFYATDTGYLYYVVQDTTTLQKSWSPGILFRGPKGEDGEQGIQGLPGSDANNIYAIKNVIDTSYENALLVIGTVPAGYMVTRIEVTIQNAYDLVVNELTVRFGGTAQSEEGSTDIAPPDYFDINTAQRYIVDEVNHEISANDEILACVFNESVNNSSVGLMTIICTIAKQLPITPIEDNI
Physico‐chemical
properties
protein length:377 AA
molecular weight: 40859,57600 Da
isoelectric point:4,05003
aromaticity:0,10610
hydropathy:-0,16790

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE98654.1
1 377
Domain Start End Length (AA) Confidence
N-terminal 1 373 373 0,7812
Central domain 374 373 1 0,0221
C-terminal 374 377 3 0,9505
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-373
Central
374-373
C-terminal
374-377

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage XbC2
[NCBI] 		2978503 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas vesicatoria
[NCBI] 		56460 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE98654.1 [NCBI]
Genbank nucleotide accession
OP292654 [NCBI]
CDS location
range 140475 -> 141608
strand -
CDS
ATGACAATTTCATTTAATAATGGGTCTTCAGGTTCTTGCAATTGTTCAGGTATTAACAATTTAGTGATCAATAACGCTGGTCATTTGATAGTTACATATGATGACAATACTATTCAAGATTTGGGTCAAGTCGTTGGTGCTAATGGCACTAATGGTACAAACTTTTATCCAAATGAAGTAGGATTCGTGATTCCAGATAGTACTTTCGATCTTGATAAAGATATTGGCTGGTCGTACTTGAGTTTAACTATTAACAGTACTCAAACCGTACCTACCATTTATTTTAAAACAAATGCGGCAAACTCTCCTACAGCAACGTGGGTTAGTGCACCATTTGGACAAGGAGCAAAGGGCGATACTGGTGAACCATTCCATATTGATTCTCAAGGCACAACTAAACCAACAACCGGTTTATTTGATAATTACACATTCTTAGATACCGATGACGGTACTATTTGGATTTACGACTTAGATACTTTAACTTGGGCTGGTCCATATCAGTTCCGTGGTGCTCAAGGTCTACAAGGTAGATTCATCATTGATTCTCAAGGTGATACTTTCCCTGTAATTACAGATTTAAATCCTGGCTATACTTTCTATGCTACTGATACAGGTTACTTGTATTATGTAGTTCAGGATACTACAACACTTCAAAAATCTTGGAGTCCTGGAATTCTATTCCGTGGTCCAAAAGGTGAAGATGGTGAACAAGGTATTCAAGGTTTACCAGGTTCTGATGCGAATAATATCTACGCAATCAAGAACGTTATTGATACATCTTACGAGAACGCATTACTTGTTATTGGTACTGTACCAGCAGGTTACATGGTAACTCGTATTGAAGTAACAATACAAAATGCTTATGATTTAGTAGTTAATGAGTTAACAGTACGATTTGGTGGCACAGCACAATCTGAAGAAGGTAGTACTGATATTGCTCCACCAGATTACTTTGATATTAATACAGCACAACGTTATATCGTTGATGAAGTAAATCATGAAATCAGTGCGAATGATGAAATTCTAGCATGTGTATTCAACGAATCTGTAAACAACAGTTCAGTAGGTCTAATGACTATTATTTGTACTATTGCTAAACAGCTTCCAATTACACCAATCGAAGACAATATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ee0e3bc5856103fa0c3899a758829f9e943faedbbb5ec8a2752910ec7b98d661
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7244
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two novel jumbo bacteriophages infecting Xanthomonas vesicatoria isolated from agricultural regions in Mexico Rubi-Rangel,L., Villicana,C., Leon-Felix,J., Amarillas,L., Carrillo-Fasio,A. and Lightbourn-Rojas,L. 2024-07-15 — GenBank