Protein

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Genbank accession
YP_009275460.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MAVPDPQLRYATDVFDADGVTTDWQISFTGGYINPSHVYAMSGLLDEETQLLTDRTPHTVEVLSEDDDASTVRVSPAVAAGRKLYIYRSTPVQQMLVDYVNGSIISKTNLNLSNDQLLKIIQEMFDSLNIATLSIDQQVGVIVDLNEIVQNIYKQVTELLAAGGIVSVAPRVWSGAWTGDQEEDDQFLIPGADVTQAGFYDVYVNGLGLEPTVDYEIIVNASNLAESAIRFAEVPAPGSIWFAVLRGYAKPYTGPQPVTALGLRLKVVEAVGPTFYADKAVEFGFIRCTNEAGCEVRVNAIPAVGDAEVKMGAGSHFSIAQKGGPVIVTADPGVVIDIPGGCLAQTRAVNSVISLTCEDADTNTWTLSGDLAKE
Physico‐chemical
properties
protein length:374 AA
molecular weight: 40081,68750 Da
isoelectric point:4,27983
aromaticity:0,07754
hydropathy:0,08930

Domains

Domains [InterPro]
DC_1031
STR
1–374
DC_1031
IPR005604
ATT
15–133
IPR005604
YP_009275460.1
1 374
Architecture
STR
ATT
STR
STR 1-14 | ATT 15-133 | STR 134-374
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009275460.1
1 374
Domain Start End Length (AA) Confidence
N-terminal 1 350 350 0,7706
Central domain 351 363 14 0,0013
C-terminal 364 374 10 0,9919
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-350
Central
351-363
C-terminal
364-374

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage f20-Xaj
[NCBI] 		1784979 Uroviricota > Caudoviricetes > Autographivirales > Gujervirinae > Pradovirus
Host Xanthomonas arboricola pv. juglandis
[NCBI] 		195709 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas arboricola

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009275460.1 [NCBI]
Genbank nucleotide accession
NC_030928.1 [NCBI]
CDS location
range 13816 -> 14940
strand -
CDS
ATGGCAGTTCCAGACCCGCAGCTGCGCTACGCGACAGACGTGTTCGACGCCGATGGCGTGACCACTGACTGGCAGATCAGCTTTACCGGTGGCTACATCAATCCGTCCCACGTGTACGCTATGAGCGGACTGCTGGACGAGGAGACTCAGCTGCTGACCGACCGGACTCCCCACACCGTGGAAGTCCTGAGCGAAGACGATGACGCTAGTACCGTCCGTGTCTCGCCTGCCGTCGCCGCTGGGCGCAAGCTCTACATCTACCGCAGCACTCCGGTGCAGCAGATGCTCGTTGACTACGTTAACGGTAGCATCATCAGCAAGACCAACCTTAACCTCAGCAACGACCAGCTACTGAAGATCATTCAGGAAATGTTCGACTCGCTCAACATCGCCACCCTCAGCATCGACCAACAGGTCGGTGTGATCGTGGACCTGAACGAGATTGTCCAGAACATCTATAAGCAGGTCACCGAGTTGCTGGCCGCTGGTGGTATCGTGTCCGTCGCCCCGCGCGTCTGGTCCGGTGCTTGGACTGGCGACCAAGAGGAGGACGATCAGTTCCTCATCCCTGGCGCAGACGTGACGCAGGCAGGCTTCTACGATGTGTATGTGAACGGCCTGGGCCTTGAGCCTACGGTTGACTACGAAATCATCGTTAACGCCAGTAACCTCGCCGAGTCCGCTATCCGCTTTGCGGAAGTGCCGGCGCCTGGCAGTATCTGGTTCGCAGTGCTGCGTGGCTACGCCAAGCCGTACACTGGACCTCAGCCTGTAACGGCACTCGGCTTGCGACTGAAGGTGGTCGAAGCTGTTGGTCCGACGTTCTACGCCGACAAGGCTGTGGAGTTCGGATTCATCCGATGCACCAACGAGGCTGGGTGCGAAGTACGAGTCAACGCTATCCCGGCGGTAGGGGATGCAGAAGTCAAGATGGGTGCGGGTAGCCACTTCAGCATTGCGCAGAAGGGAGGCCCTGTCATCGTGACTGCTGACCCTGGCGTCGTCATCGACATCCCAGGAGGTTGCCTTGCGCAGACGCGAGCAGTAAACTCTGTGATCAGTCTAACCTGCGAAGATGCAGACACCAACACCTGGACACTATCCGGCGATCTTGCTAAGGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
7cf4cb67682154aecd310fda0c0da210df0c43332a67c8f086adecf54f65eba9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8084
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50